Literature DB >> 11536569

Kinetics of the hydrolysis of guanosine 5'-phospho-2-methylimidazolide.

A Kanavarioti1.   

Abstract

We have studied the hydrolysis of guanosine 5'-phospho-2-methylimidazolide, 2-MeImpG, in aqueous buffered solutions of various pH's at 75 degrees C and 37 degrees C. At 75 degrees C and pH < or = 1.0, two kinetic processes were observed spectrophotometrically: the first and more rapid one is attributed to the hydrolysis of the phosphoimidazolide P-N bond; the second and much slower one, to the cleavage of the glycosidic bond. At 37 degrees C, pH 2.0, the spectrophotometrically determined rate constant of P-N bond hydrolysis was confirmed by using high pressure liquid chromatography, HPLC. With the latter technique it was possible to separate reactants and products and also to extend the pH-rate profile into the neutral region where rates are slower and, therefore, difficult to measure spectrophotometrically. The pH-rate profiles at both temperatures exhibit similar behavior. At pH < 2 the pseudo-first-order rate constant increases with decreasing pH; in the region 2 < pH < 7 there is a plateau followed by a decrease for pH > 7. These data are consistent with a reactivity order zwitterion > anion for P-N bond hydrolysis. It is noteworthy that P-N bond hydrolysis in phosphoimidazolides is very slow compared to other phosphoramidates. This may be one of the reasons why this compound showed extraordinary ability in forming long oligomers under template-directed conditions.

Entities:  

Keywords:  NASA Center ARC; NASA Discipline Exobiology

Mesh:

Substances:

Year:  1986        PMID: 11536569     DOI: 10.1007/bf01809815

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  12 in total

1.  Temperature-dependence of the template-directed synthesis of oligoguanylates.

Authors:  H Fakhrai; T Inoue; L E Orgel
Journal:  Tetrahedron       Date:  1984       Impact factor: 2.457

2.  Template-directed synthesis of novel, nucleic acid-like structures.

Authors:  A W Schwartz; L E Orgel
Journal:  Science       Date:  1985-05-03       Impact factor: 47.728

3.  Hydrolytic properties of phenylalanyl- and N-acetylphenylalanyl adenylate anhydrides.

Authors:  J C Lacey; N Senaratne; D W Mullins
Journal:  Orig Life Evol Biosph       Date:  1984       Impact factor: 1.950

4.  Catalysis of internucleotide bond formation by divalent metal ions.

Authors:  H Sawai
Journal:  J Am Chem Soc       Date:  1976-10-27       Impact factor: 15.419

5.  Template-directed synthesis on oligodeoxycytidylate and polydeoxycytidylate templates.

Authors:  C B Chen; T Inoue; L E Orgel
Journal:  J Mol Biol       Date:  1985-01-20       Impact factor: 5.469

6.  Detection of bound phosphohistidine in E. coli succinate thiokinase.

Authors:  G Kreil; P D Boyer
Journal:  Biochem Biophys Res Commun       Date:  1964-08-11       Impact factor: 3.575

7.  Efficient catalysis of polycytidylic acid-directed oligoguanylate formation by Pb2+.

Authors:  R Lohrmann; L E Orgel
Journal:  J Mol Biol       Date:  1980-10-05       Impact factor: 5.469

8.  Oligomerization of (guanosine 5'-phosphor)-2-methylimidazolide on poly(C). An RNA polymerase model.

Authors:  T Inoue; L E Orgel
Journal:  J Mol Biol       Date:  1982-11-25       Impact factor: 5.469

9.  Oligouridylates as a template for nonenzymatic synthesis of oligoadenylates.

Authors:  H Sawai
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

10.  A nonenzymatic RNA polymerase model.

Authors:  T Inoue; L E Orgel
Journal:  Science       Date:  1983-02-18       Impact factor: 47.728

View more
  5 in total

1.  Oligomerization of cytosine-containing nucleotide analogs in aqueous solution.

Authors:  J Visscher; A W Schwartz
Journal:  J Mol Evol       Date:  1990-01       Impact factor: 2.395

2.  Reaction on alternating GC oligonucleotide templates.

Authors:  K E Ng; L E Orgel
Journal:  J Mol Evol       Date:  1989-08       Impact factor: 2.395

3.  Limiting concentrations of activated mononucleotides necessary for poly(C)-directed elongation of oligoguanylates.

Authors:  A Kanavarioti; S Chang; D J Alberas
Journal:  J Mol Evol       Date:  1990-12       Impact factor: 2.395

4.  Dimerization in highly concentrated solutions of phosphoimidazolide activated mononucleotides.

Authors:  A Kanavarioti
Journal:  Orig Life Evol Biosph       Date:  1997-08       Impact factor: 1.950

5.  Kinetic analysis of the template effect in ribooligoguanylate elongation.

Authors:  A Kanavarioti; D H White
Journal:  Orig Life Evol Biosph       Date:  1987       Impact factor: 1.950

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.