Literature DB >> 11536228

Genetic analysis of hepatitis A virus outbreak in France confirms the co-circulation of subgenotypes Ia, Ib and reveals a new genetic lineage.

M Costa-Mattioli1, S Monpoeho, C Schvoerer, B Besse, M H Aleman, S Billaudel, J Cristina, V Ferré.   

Abstract

Genetic analysis of selected genome regions of hepatitis A Virus (HAV) suggested that distinct genotype could be defined in different geographic locations. In order to study the degree of genetic variability among HAV isolated during a single epidemic outbreak, sequences from a 148 base pair segment within the VP1 amino terminal region were obtained for eight distinct HAV isolates from an outbreak that occurred in North Bretagne (France). These sequences were compared among themselves and with published sequences from 30 different strains that represented different HAV sub-genotypes that were isolated all over the world. Phylogenetic analysis revealed an extensive genetic heterogeneity among strains belonging to the same outbreak and revealed co-circulation of sub-genotype IA, IB, and the presence of IIIA sub-genotype for the first time in a Mediterranean country. Copyright 2001 Wiley-Liss, Inc.

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Year:  2001        PMID: 11536228     DOI: 10.1002/jmv.2025

Source DB:  PubMed          Journal:  J Med Virol        ISSN: 0146-6615            Impact factor:   2.327


  9 in total

1.  Molecular evolution of hepatitis A virus: a new classification based on the complete VP1 protein.

Authors:  Mauro Costa-Mattioli; Juan Cristina; Héctor Romero; Raoul Perez-Bercof; Didier Casane; Rodney Colina; Laura Garcia; Ines Vega; Graciela Glikman; Victor Romanowsky; Alejandro Castello; Elisabeth Nicand; Michelle Gassin; Sylviane Billaudel; Virginie Ferré
Journal:  J Virol       Date:  2002-09       Impact factor: 5.103

2.  Outbreak of infection with hepatitis A virus (HAV) associated with a foodhandler and confirmed by sequence analysis reveals a new HAV genotype IB variant.

Authors:  Maria Chironna; Pierluigi Lopalco; Rosa Prato; Cinzia Germinario; Salvatore Barbuti; Michele Quarto
Journal:  J Clin Microbiol       Date:  2004-06       Impact factor: 5.948

Review 3.  Diagnosis of hepatitis a virus infection: a molecular approach.

Authors:  Omana V Nainan; Guoliang Xia; Gilberto Vaughan; Harold S Margolis
Journal:  Clin Microbiol Rev       Date:  2006-01       Impact factor: 26.132

4.  Epidemiological and virological characterization of a large community-wide outbreak of hepatitis A in southern Italy.

Authors:  G Pontrelli; D Boccia; M DI Renzi; M Massari; F Giugliano; L Pastore Celentano; S Taffon; D Genovese; S DI Pasquale; F Scalise; M Rapicetta; L Croci; S Salmaso
Journal:  Epidemiol Infect       Date:  2007-09-25       Impact factor: 2.451

5.  Genetic analysis of hepatitis A virus strains that induced epidemics in Korea during 2007-2009.

Authors:  Hyeokjin Lee; Hyesook Jeong; Heasun Yun; Kisang Kim; Jong-Hyun Kim; Jai Myung Yang; Doo-Sung Cheon
Journal:  J Clin Microbiol       Date:  2012-01-11       Impact factor: 5.948

6.  Seroprevalence and Molecular Characterisation of Human Hepatitis A virus in Serum Samples of Tunisian Patients with Clinical Symptoms of Viral Hepatitis.

Authors:  Hakima Gharbi-Khelifi; Nabil Ben Salem Abid; Abir Beji; Leila Bhiri; Rafik Harrath; Khira Sdiri; Sylviane Billaudel; Virginie Ferre; Mahjoub Aouni
Journal:  Indian J Virol       Date:  2012-03-25

7.  Full-length genomic sequence of subgenotype IIIA hepatitis A virus isolate in Republic of Korea.

Authors:  Ah-Ra Lee; Sung-Geun Lee; Lae-Hyung Kang; Weon-Hwa Jheong; Soon-Young Paik
Journal:  Biomed Res Int       Date:  2013-08-07       Impact factor: 3.411

8.  Characterization of outbreak hepatitis a isolates in five Tunisian childcare centers.

Authors:  Hakima Gharbi-Khelifi; Nabil Ben Salem Abid; Khira Sdiri; Rafik Harrath; Abir Beji; Leila Bhiri; Sylviane Billaudel; Virginie Ferre; Mahjoub Aouni
Journal:  Braz J Microbiol       Date:  2011-09-01       Impact factor: 2.476

9.  Usability of the international HAVNet hepatitis A virus database for geographical annotation, backtracing and outbreak detection.

Authors:  Annelies Kroneman; Rita de Sousa; Linda Verhoef; Marion P G Koopmans; Harry Vennema
Journal:  Euro Surveill       Date:  2018-09
  9 in total

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