Literature DB >> 11535063

Biosynthesis of the phosphodiester bond in coenzyme F(420) in the methanoarchaea.

M Graupner1, R H White.   

Abstract

The biochemical route for the formation of the phosphodiester bond in coenzyme F(420), one of the methanogenic coenzymes, has been established in the methanoarchaea Methanosarcina thermophila and Methanococcus jannaschii. The first step in the formation of this portion of the F(420) structure is the GTP-dependent phosphorylation of L-lactate to 2-phospho-L-lactate and GDP. The 2-phospho-L-lactate represents a new natural product that was chemically identified in Methanobacterium thermoautotrophicum, M. thermophila, and Mc. jannaschii. Incubation of cell extracts of both M. thermophila and Mc. jannaschii with [hydroxy-(18)O, carboxyl-(18)O(2)]lactate and GTP produced 2-phospho-L-lactate with the same (18)O distribution as found in both the starting lactate and the lactate recovered from the incubation. These results indicate that the carboxyl oxygens are not involved in the phosphorylation reaction. Incubation of Sephadex G-25 purified cell extracts of M. thermophila or Mc. jannaschii with 7,8-didemethyl-8-hydroxy-5-deazariboflavin (Fo), 2-phospho-L-lactate, and GTP or ATP lead to the formation of F(420)-0 (F(420) with no glutamic acids). This transformation was shown to involve two steps: (i) the GTP- or ATP-dependent activation of 2-phospho-L-lactate to either lactyl(2)diphospho-(5')guanosine (LPPG) or lactyl(2)diphospho-(5')adenosine (LPPA) and (ii) the reaction of the resulting LPPG or LPPA with Fo to form F(420)-0 with release of GMP or AMP. Attempts to identify LPPG or LPPA intermediates by incubation of cell extracts with L-[U-(14)C]lactate, [U-(14)C]2-phospho-L-lactate, or [8-(3)H]GTP were not successful owing to the instability of these compounds toward hydrolysis. Synthetically prepared LPPG and LPPA had half-lives of 10 min at 50 degrees C (at pH 7.0) and decomposed into GMP or AMP and 2-phospho-L-lactate via cyclic 2-phospho-L-lactate. No evidence for the functioning of the cyclic 2-phospho-L-lactate in the in vitro biosynthesis could be demonstrated. Incubation of cell extracts of M. thermophila or Mc. jannaschii with either LPPG or LPPA and Fo generated F(420)-0. In summary, this study demonstrates that the formation of the phosphodiester bond in coenzyme F(420) follows a reaction scheme like that found in one of the steps of the DNA ligase reaction and in the biosynthesis of coenzyme B(12) and phospholipids.

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Year:  2001        PMID: 11535063     DOI: 10.1021/bi0107703

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Use of transposon Tn5367 mutagenesis and a nitroimidazopyran-based selection system to demonstrate a requirement for fbiA and fbiB in coenzyme F(420) biosynthesis by Mycobacterium bovis BCG.

Authors:  K P Choi; T B Bair; Y M Bae; L Daniels
Journal:  J Bacteriol       Date:  2001-12       Impact factor: 3.490

2.  The pyrimidine nucleotide reductase step in riboflavin and F(420) biosynthesis in archaea proceeds by the eukaryotic route to riboflavin.

Authors:  Marion Graupner; Huimin Xu; Robert H White
Journal:  J Bacteriol       Date:  2002-04       Impact factor: 3.490

3.  The methanogenic redox cofactor F420 is widely synthesized by aerobic soil bacteria.

Authors:  Blair Ney; F Hafna Ahmed; Carlo R Carere; Ambarish Biswas; Andrew C Warden; Sergio E Morales; Gunjan Pandey; Stephen J Watt; John G Oakeshott; Matthew C Taylor; Matthew B Stott; Colin J Jackson; Chris Greening
Journal:  ISME J       Date:  2016-08-09       Impact factor: 10.302

4.  Demonstration that fbiC is required by Mycobacterium bovis BCG for coenzyme F(420) and FO biosynthesis.

Authors:  Kwang-Pil Choi; Nathan Kendrick; Lacy Daniels
Journal:  J Bacteriol       Date:  2002-05       Impact factor: 3.490

5.  Identification of lactaldehyde dehydrogenase in Methanocaldococcus jannaschii and its involvement in production of lactate for F420 biosynthesis.

Authors:  Laura L Grochowski; Huimin Xu; Robert H White
Journal:  J Bacteriol       Date:  2006-04       Impact factor: 3.490

6.  Methanococcus jannaschii coenzyme F420 analogs contain a terminal alpha-linked glutamate.

Authors:  Marion Graupner; Robert H White
Journal:  J Bacteriol       Date:  2003-08       Impact factor: 3.490

Review 7.  Physiology, Biochemistry, and Applications of F420- and Fo-Dependent Redox Reactions.

Authors:  Chris Greening; F Hafna Ahmed; A Elaaf Mohamed; Brendon M Lee; Gunjan Pandey; Andrew C Warden; Colin Scott; John G Oakeshott; Matthew C Taylor; Colin J Jackson
Journal:  Microbiol Mol Biol Rev       Date:  2016-04-27       Impact factor: 11.056

8.  Molecular insights into the biosynthesis of the F420 coenzyme.

Authors:  Farhad Forouhar; Mariam Abashidze; Huimin Xu; Laura L Grochowski; Jayaraman Seetharaman; Munif Hussain; Alexandre Kuzin; Yang Chen; Weihong Zhou; Rong Xiao; Thomas B Acton; Gaetano T Montelione; Anne Galinier; Robert H White; Liang Tong
Journal:  J Biol Chem       Date:  2008-02-05       Impact factor: 5.157

9.  Methanocaldococcus jannaschii uses a modified mevalonate pathway for biosynthesis of isopentenyl diphosphate.

Authors:  Laura L Grochowski; Huimin Xu; Robert H White
Journal:  J Bacteriol       Date:  2006-05       Impact factor: 3.490

10.  Cofactor F420: an expanded view of its distribution, biosynthesis and roles in bacteria and archaea.

Authors:  Rhys Grinter; Chris Greening
Journal:  FEMS Microbiol Rev       Date:  2021-09-08       Impact factor: 16.408

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