Literature DB >> 11533667

Four-dimensional imaging and quantitative reconstruction to analyse complex spatiotemporal processes in live cells.

D Gerlich1, J Beaudouin, M Gebhard, J Ellenberg, R Eils.   

Abstract

Live-cell imaging technology using fluorescent proteins (green fluorescent protein and its homologues) has revolutionized the study of cellular dynamics. But tools that can quantitatively analyse complex spatiotemporal processes in live cells remain lacking. Here we describe a new technique--fast multi-colour four-dimensional imaging combined with automated and quantitative time-space reconstruction--to fill this gap. As a proof of principle, we apply this method to study the re-formation of the nuclear envelope in live cells. Four-dimensional imaging of three spectrally distinct fluorescent proteins is used to simultaneously visualize three different cellular compartments at high speed and with high spatial resolution. The highly complex data, comprising several thousand images from a single cell, were quantitatively reconstructed in time-space by software developed in-house. This analysis reveals quantitative and qualitative insights into the highly ordered topology of nuclear envelope formation, in correlation with chromatin expansion - results that would have been impossible to achieve by manual inspection alone. Our new technique will greatly facilitate study of the highly ordered dynamic architecture of eukaryotic cells.

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Year:  2001        PMID: 11533667     DOI: 10.1038/ncb0901-852

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  28 in total

1.  Sequential entry of components of the gene expression machinery into daughter nuclei.

Authors:  Kannanganattu V Prasanth; Paula A Sacco-Bubulya; Supriya G Prasanth; David L Spector
Journal:  Mol Biol Cell       Date:  2003-03       Impact factor: 4.138

2.  Replication-competent influenza A virus that encodes a split-green fluorescent protein-tagged PB2 polymerase subunit allows live-cell imaging of the virus life cycle.

Authors:  Sergiy V Avilov; Dorothée Moisy; Sandie Munier; Oliver Schraidt; Nadia Naffakh; Stephen Cusack
Journal:  J Virol       Date:  2011-11-23       Impact factor: 5.103

3.  Quantitating intracellular transport of polyplexes by spatio-temporal image correlation spectroscopy.

Authors:  Rajan P Kulkarni; David D Wu; Mark E Davis; Scott E Fraser
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-16       Impact factor: 11.205

4.  Quantitative imaging of lymphocyte membrane protein reorganization and signaling.

Authors:  Peter M Kasson; Johannes B Huppa; Michelle Krogsgaard; Mark M Davis; Axel T Brunger
Journal:  Biophys J       Date:  2004-10-22       Impact factor: 4.033

5.  Dissecting the contribution of diffusion and interactions to the mobility of nuclear proteins.

Authors:  Joël Beaudouin; Felipe Mora-Bermúdez; Thorsten Klee; Nathalie Daigle; Jan Ellenberg
Journal:  Biophys J       Date:  2005-12-30       Impact factor: 4.033

6.  Automated local bright feature image analysis of nuclear protein distribution identifies changes in tissue phenotype.

Authors:  David W Knowles; Damir Sudar; Carol Bator-Kelly; Mina J Bissell; Sophie A Lelièvre
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-10       Impact factor: 11.205

7.  Membrane shape as a reporter for applied forces.

Authors:  Heun Jin Lee; Eric L Peterson; Rob Phillips; William S Klug; Paul A Wiggins
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-01       Impact factor: 11.205

Review 8.  Assays for mitotic chromosome condensation in live yeast and mammalian cells.

Authors:  Gabriel Neurohr; Daniel W Gerlich
Journal:  Chromosome Res       Date:  2009       Impact factor: 5.239

9.  Diffusion of large molecules into assembling nuclei revealed using an optical highlighting technique.

Authors:  Satoshi Shimozono; Hidekazu Tsutsui; Atsushi Miyawaki
Journal:  Biophys J       Date:  2009-09-02       Impact factor: 4.033

10.  Orientation and polarity in collectively migrating cell structures: statics and dynamics.

Authors:  M Reffay; L Petitjean; S Coscoy; E Grasland-Mongrain; F Amblard; A Buguin; P Silberzan
Journal:  Biophys J       Date:  2011-06-08       Impact factor: 4.033

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