Literature DB >> 11528003

Allosteric regulation of catalytic activity: Escherichia coli aspartate transcarbamoylase versus yeast chorismate mutase.

K Helmstaedt1, S Krappmann, G H Braus.   

Abstract

Allosteric regulation of key metabolic enzymes is a fascinating field to study the structure-function relationship of induced conformational changes of proteins. In this review we compare the principles of allosteric transitions of the complex classical model aspartate transcarbamoylase (ATCase) from Escherichia coli, consisting of 12 polypeptides, and the less complicated chorismate mutase derived from baker's yeast, which functions as a homodimer. Chorismate mutase presumably represents the minimal oligomerization state of a cooperative enzyme which still can be either activated or inhibited by different heterotropic effectors. Detailed knowledge of the number of possible quaternary states and a description of molecular triggers for conformational changes of model enzymes such as ATCase and chorismate mutase shed more and more light on allostery as an important regulatory mechanism of any living cell. The comparison of wild-type and engineered mutant enzymes reveals that current textbook models for regulation do not cover the entire picture needed to describe the function of these enzymes in detail.

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Year:  2001        PMID: 11528003      PMCID: PMC99034          DOI: 10.1128/MMBR.65.3.404-421.2001

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  99 in total

1.  Assessment of the allosteric mechanism of aspartate transcarbamoylase based on the crystalline structure of the unregulated catalytic subunit.

Authors:  P T Beernink; J A Endrizzi; T Alber; H K Schachman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-11       Impact factor: 11.205

2.  The influence of the regulatory chain amino acids Glu-62 and IIe-12 on the heterotropic properties of Escherichia coli aspartate transcarbamoylase.

Authors:  M Dutta; E R Kantrowitz
Journal:  Biochemistry       Date:  1998-06-16       Impact factor: 3.162

Review 3.  Co-operative and allosteric enzymes: 20 years on.

Authors:  J Ricard; A Cornish-Bowden
Journal:  Eur J Biochem       Date:  1987-07-15

4.  The 80s loop of the catalytic chain of Escherichia coli aspartate transcarbamoylase is critical for catalysis and homotropic cooperativity.

Authors:  C Macol; M Dutta; B Stec; H Tsuruta; E R Kantrowitz
Journal:  Protein Sci       Date:  1999-06       Impact factor: 6.725

5.  The aroC gene of Aspergillus nidulans codes for a monofunctional, allosterically regulated chorismate mutase.

Authors:  S Krappmann; K Helmstaedt; T Gerstberger; S Eckert; B Hoffmann; M Hoppert; G Schnappauf; G H Braus
Journal:  J Biol Chem       Date:  1999-08-06       Impact factor: 5.157

6.  Electrostatics, allostery, and activity of the yeast chorismate mutase.

Authors:  S L Lin; D Xu; A Li; R Nussinov
Journal:  Proteins       Date:  1998-06-01

7.  A single mutation in the regulatory chain of Escherichia coli aspartate transcarbamoylase results in an extreme T-state structure.

Authors:  M K Williams; B Stec; E R Kantrowitz
Journal:  J Mol Biol       Date:  1998-08-07       Impact factor: 5.469

8.  2.5 A structure of aspartate carbamoyltransferase complexed with the bisubstrate analog N-(phosphonacetyl)-L-aspartate.

Authors:  K L Krause; K W Volz; W N Lipscomb
Journal:  J Mol Biol       Date:  1987-02-05       Impact factor: 5.469

9.  Tyrosine and tryptophan act through the same binding site at the dimer interface of yeast chorismate mutase.

Authors:  G Schnappauf; S Krappmann; G H Braus
Journal:  J Biol Chem       Date:  1998-07-03       Impact factor: 5.157

10.  A small, thermostable, and monofunctional chorismate mutase from the archaeon Methanococcus jannaschii.

Authors:  G MacBeath; P Kast; D Hilvert
Journal:  Biochemistry       Date:  1998-07-14       Impact factor: 3.162

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  17 in total

Review 1.  Archaeal protein kinases and protein phosphatases: insights from genomics and biochemistry.

Authors:  Peter J Kennelly
Journal:  Biochem J       Date:  2003-03-01       Impact factor: 3.857

2.  New insights into allosteric mechanisms from trapping unstable protein conformations in silica gels.

Authors:  Cristiano Viappiani; Stefano Bettati; Stefano Bruno; Luca Ronda; Stefania Abbruzzetti; Andrea Mozzarelli; William A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-22       Impact factor: 11.205

3.  High resolution approach to the native state ensemble kinetics and thermodynamics.

Authors:  Sangwook Wu; Pavel I Zhuravlev; Garegin A Papoian
Journal:  Biophys J       Date:  2008-09-19       Impact factor: 4.033

4.  Competing allosteric mechanisms modulate substrate binding in a dimeric enzyme.

Authors:  Lee A Freiburger; Oliver M Baettig; Tara Sprules; Albert M Berghuis; Karine Auclair; Anthony K Mittermaier
Journal:  Nat Struct Mol Biol       Date:  2011-01-30       Impact factor: 15.369

5.  Complex Formation between Two Biosynthetic Enzymes Modifies the Allosteric Regulatory Properties of Both: AN EXAMPLE OF MOLECULAR SYMBIOSIS.

Authors:  Nicola J Blackmore; Ali Reza Nazmi; Richard D Hutton; Melissa N Webby; Edward N Baker; Geoffrey B Jameson; Emily J Parker
Journal:  J Biol Chem       Date:  2015-06-01       Impact factor: 5.157

6.  Transmembrane allosteric energetics characterization for strong coupling between proton and potassium ion binding in the KcsA channel.

Authors:  Yunyao Xu; Manasi P Bhate; Ann E McDermott
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-02       Impact factor: 11.205

7.  Hierarchical organization of eglin c native state dynamics is shaped by competing direct and water-mediated interactions.

Authors:  Christopher Kroboth Materese; Christa Charisse Goldmon; Garegin A Papoian
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-29       Impact factor: 11.205

8.  Integrated transcriptomic and proteomic analysis of the bile stress response in a centenarian-originated probiotic Bifidobacterium longum BBMN68.

Authors:  Haoran An; François P Douillard; Guohong Wang; Zhengyuan Zhai; Jin Yang; Shuhui Song; Jianyun Cui; Fazheng Ren; Yunbo Luo; Bing Zhang; Yanling Hao
Journal:  Mol Cell Proteomics       Date:  2014-06-25       Impact factor: 5.911

9.  Structures of open (R) and close (T) states of prephenate dehydratase (PDT)--implication of allosteric regulation by L-phenylalanine.

Authors:  Kemin Tan; Hui Li; Rongguang Zhang; Minyi Gu; Shonda T Clancy; Andrzej Joachimiak
Journal:  J Struct Biol       Date:  2007-11-29       Impact factor: 2.867

10.  Silencing of Vlaro2 for chorismate synthase revealed that the phytopathogen Verticillium longisporum induces the cross-pathway control in the xylem.

Authors:  Seema Singh; Susanna A Braus-Stromeyer; Christian Timpner; Van Tuan Tran; Gertrud Lohaus; Michael Reusche; Jessica Knüfer; Thomas Teichmann; Andreas von Tiedemann; Gerhard H Braus
Journal:  Appl Microbiol Biotechnol       Date:  2009-10-14       Impact factor: 4.813

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