Literature DB >> 11525835

CTCF is a uniquely versatile transcription regulator linked to epigenetics and disease.

R Ohlsson1, R Renkawitz, V Lobanenkov.   

Abstract

CTCF is an evolutionarily conserved zinc finger (ZF) phosphoprotein that binds through combinatorial use of its 11 ZFs to approximately 50 bp target sites that have remarkable sequence variation. Formation of different CTCF-DNA complexes, some of which are methylation-sensitive, results in distinct functions, including gene activation, repression, silencing and chromatin insulation. Disrupting the spectrum of target specificities by ZF mutations or by abnormal selective methylation of targets is associated with cancer. CTCF emerges, therefore, as a central player in networks linking expression domains with epigenetics and cell growth regulation.

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Year:  2001        PMID: 11525835     DOI: 10.1016/s0168-9525(01)02366-6

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  280 in total

1.  Multiple nucleosome positioning sites regulate the CTCF-mediated insulator function of the H19 imprinting control region.

Authors:  Meena Kanduri; Chandrasekhar Kanduri; Piero Mariano; Alexander A Vostrov; Wolfgang Quitschke; Victor Lobanenkov; Rolf Ohlsson
Journal:  Mol Cell Biol       Date:  2002-05       Impact factor: 4.272

2.  The nucleotides responsible for the direct physical contact between the chromatin insulator protein CTCF and the H19 imprinting control region manifest parent of origin-specific long-distance insulation and methylation-free domains.

Authors:  Vinod Pant; Piero Mariano; Chandrasekhar Kanduri; Anita Mattsson; Victor Lobanenkov; Rainer Heuchel; Rolf Ohlsson
Journal:  Genes Dev       Date:  2003-03-01       Impact factor: 11.361

Review 3.  Tissue-specific regulation and function of Grb10 during growth and neuronal commitment.

Authors:  Robert N Plasschaert; Marisa S Bartolomei
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-03       Impact factor: 11.205

4.  The vertebrate protein CTCF functions as an insulator in Saccharomyces cerevisiae.

Authors:  Pierre-Antoine Defossez; Eric Gilson
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

5.  Comparative sequence and x-inactivation analyses of a domain of escape in human xp11.2 and the conserved segment in mouse.

Authors:  Karen D Tsuchiya; John M Greally; Yajun Yi; Kevin P Noel; Jean-Pierre Truong; Christine M Disteche
Journal:  Genome Res       Date:  2004-06-14       Impact factor: 9.043

6.  Role of CTCF binding sites in the Igf2/H19 imprinting control region.

Authors:  Piroska E Szabó; Shih-Huey E Tang; Francisco J Silva; Walter M K Tsark; Jeffrey R Mann
Journal:  Mol Cell Biol       Date:  2004-06       Impact factor: 4.272

7.  The binding sites for the chromatin insulator protein CTCF map to DNA methylation-free domains genome-wide.

Authors:  Rituparna Mukhopadhyay; WenQiang Yu; Joanne Whitehead; JunWang Xu; Magda Lezcano; Svetlana Pack; Chandrasekhar Kanduri; Meena Kanduri; Vasudeva Ginjala; Alexander Vostrov; Wolfgang Quitschke; Igor Chernukhin; Elena Klenova; Victor Lobanenkov; Rolf Ohlsson
Journal:  Genome Res       Date:  2004-07-15       Impact factor: 9.043

8.  Mutation of a single CTCF target site within the H19 imprinting control region leads to loss of Igf2 imprinting and complex patterns of de novo methylation upon maternal inheritance.

Authors:  Vinod Pant; Sreenivasulu Kurukuti; Elena Pugacheva; Shaharum Shamsuddin; Piero Mariano; Rainer Renkawitz; Elena Klenova; Victor Lobanenkov; Rolf Ohlsson
Journal:  Mol Cell Biol       Date:  2004-04       Impact factor: 4.272

Review 9.  The X as model for RNA's niche in epigenomic regulation.

Authors:  Jeannie T Lee
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-03-31       Impact factor: 10.005

10.  Functional intergenic transcription: a case study of the X-inactivation centre.

Authors:  Jeannie T Lee
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-08-29       Impact factor: 6.237

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