Literature DB >> 11520340

The threshold model as a general purpose normalizing transformation.

D A Roff1.   

Abstract

The estimation of heritabilities and genetic correlations is based on the assumption that the trait distributions are normal. When the distributions are not normal it is advisable to transform the data to produce normality. However, it is possible that no suitable transformation can be found. The purpose of the present paper is to point out that the threshold model of quantitative genetics can be used as a generalized transformation. To utilize this method it is only necessary to divide the data at the median (approximately) and code the two halves as 0 and 1. Estimates can then be made using algorithms outlined herein. A simulation study shows that the threshold transformation gave unbiased estimates of the heritability and genetic correlation in all cases. The 95% confidence limits correctly included the true heritability value in the required 95% of cases, while the estimated confidence region for the genetic correlation was also correct provided that the geometric mean heritability was greater than approximately 0.15, a restriction that applied also to the normally distributed data. Confidence intervals estimated from the non-normal data were consistently too small. The method is illustrated using data on the proportion of diapausing eggs produced by the cricket, Allonemobius socius.

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Year:  2001        PMID: 11520340     DOI: 10.1046/j.1365-2540.2001.00844.x

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  6 in total

Review 1.  Applying a quantitative genetics framework to behavioural syndrome research.

Authors:  Ned A Dochtermann; Derek A Roff
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-12-27       Impact factor: 6.237

2.  Bias in the heritability of preference and its potential impact on the evolution of mate choice.

Authors:  D A Roff; D J Fairbairn
Journal:  Heredity (Edinb)       Date:  2015-01-21       Impact factor: 3.821

3.  Natural and sexual selection on cuticular hydrocarbons: a quantitative genetic analysis.

Authors:  Jacob D Berson; Marlene Zuk; Leigh W Simmons
Journal:  Proc Biol Sci       Date:  2019-05-15       Impact factor: 5.349

4.  Individual experience and evolutionary history of predation affect expression of heritable variation in fish personality and morphology.

Authors:  Niels J Dingemanse; Fons Van der Plas; Jonathan Wright; Denis Réale; Maarten Schrama; Derek A Roff; Els Van der Zee; Iain Barber
Journal:  Proc Biol Sci       Date:  2009-01-06       Impact factor: 5.349

5.  Quantitative genetics of immunity and life history under different photoperiods.

Authors:  K Hammerschmidt; P Deines; A J Wilson; J Rolff
Journal:  Heredity (Edinb)       Date:  2011-12-21       Impact factor: 3.821

6.  A multivariate analysis of genetic constraints to life history evolution in a wild population of red deer.

Authors:  Craig A Walling; Michael B Morrissey; Katharina Foerster; Tim H Clutton-Brock; Josephine M Pemberton; Loeske E B Kruuk
Journal:  Genetics       Date:  2014-10-02       Impact factor: 4.562

  6 in total

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