Literature DB >> 11506667

A spike-train probability model.

R E Kass1, V Ventura.   

Abstract

Poisson processes usually provide adequate descriptions of the irregularity in neuron spike times after pooling the data across large numbers of trials, as is done in constructing the peristimulus time histogram. When probabilities are needed to describe the behavior of neurons within individual trials, however, Poisson process models are often inadequate. In principle, an explicit formula gives the probability density of a single spike train in great generality, but without additional assumptions, the firing-rate intensity function appearing in that formula cannot be estimated. We propose a simple solution to this problem, which is to assume that the time at which a neuron fires is determined probabilistically by, and only by, two quantities: the experimental clock time and the elapsed time since the previous spike. We show that this model can be fitted with standard methods and software and that it may used successfully to fit neuronal data.

Mesh:

Year:  2001        PMID: 11506667     DOI: 10.1162/08997660152469314

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  53 in total

1.  Contrasting patterns of receptive field plasticity in the hippocampus and the entorhinal cortex: an adaptive filtering approach.

Authors:  Loren M Frank; Uri T Eden; Victor Solo; Matthew A Wilson; Emery N Brown
Journal:  J Neurosci       Date:  2002-05-01       Impact factor: 6.167

2.  Decoding spike trains instant by instant using order statistics and the mixture-of-Poissons model.

Authors:  Matthew C Wiener; Barry J Richmond
Journal:  J Neurosci       Date:  2003-03-15       Impact factor: 6.167

3.  A point process analysis of sensory encoding.

Authors:  Garrett B Stanley; Roxanna M Webber
Journal:  J Comput Neurosci       Date:  2003 Nov-Dec       Impact factor: 1.621

Review 4.  Neurophysiological and computational principles of cortical rhythms in cognition.

Authors:  Xiao-Jing Wang
Journal:  Physiol Rev       Date:  2010-07       Impact factor: 37.312

5.  Spike train decoding without spike sorting.

Authors:  Valérie Ventura
Journal:  Neural Comput       Date:  2008-04       Impact factor: 2.026

6.  Spike train probability models for stimulus-driven leaky integrate-and-fire neurons.

Authors:  Shinsuke Koyama; Robert E Kass
Journal:  Neural Comput       Date:  2008-07       Impact factor: 2.026

7.  Analysis of between-trial and within-trial neural spiking dynamics.

Authors:  Gabriela Czanner; Uri T Eden; Sylvia Wirth; Marianna Yanike; Wendy A Suzuki; Emery N Brown
Journal:  J Neurophysiol       Date:  2008-01-23       Impact factor: 2.714

8.  Comparison of local measures of spike time irregularity and relating variability to firing rate in motor cortical neurons.

Authors:  Adrián Ponce-Alvarez; Bjørg Elisabeth Kilavik; Alexa Riehle
Journal:  J Comput Neurosci       Date:  2009-05-16       Impact factor: 1.621

9.  Bayesian inference of functional connectivity and network structure from spikes.

Authors:  Ian H Stevenson; James M Rebesco; Nicholas G Hatsopoulos; Zach Haga; Lee E Miller; Konrad P Körding
Journal:  IEEE Trans Neural Syst Rehabil Eng       Date:  2008-12-09       Impact factor: 3.802

10.  Modeling task-specific neuronal ensembles improves decoding of grasp.

Authors:  Ryan J Smith; Alcimar B Soares; Adam G Rouse; Marc H Schieber; Nitish V Thakor
Journal:  J Neural Eng       Date:  2018-02-02       Impact factor: 5.379

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