Literature DB >> 11504727

Functional equality in the absence of structural similarity: an added dimension to molecular mimicry.

M Goel1, D Jain, K J Kaur, R Kenoth, B G Maiya, M J Swamy, D M Salunke.   

Abstract

The crystal structure of meso-tetrasulfonatophenylporphyrin complexed with concanavalin A (ConA) was determined at 1.9 A resolution. Comparison of this structure with that of ConA bound to methyl alpha-d-mannopyranoside provided direct structural evidence of molecular mimicry in the context of ligand receptor binding. The sulfonatophenyl group of meso-tetrasulfonatophenylporphyrin occupies the same binding site on ConA as that of methyl alpha-d-mannopyranoside, a natural ligand. A pair of stacked porphyrin molecules stabilizes the crystal structure by end-to-end cross-linking with ConA resulting in a network similar to that observed upon agglutination of cells by lectins. The porphyrin binds to ConA predominantly through hydrogen bonds and water-mediated interactions. The sandwiched water molecules in the complex play a cementing role, facilitating favorable binding of porphyrin. Seven of the eight hydrogen bonds observed between methyl alpha-d-mannopyranoside and ConA are mimicked by the sulfonatophenyl group of porphyrin after incorporating two water molecules. Thus, the similarity in chemical interactions was manifested in terms of functional mimicry despite the obvious structural dissimilarity between the sugar and the porphyrin.

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Year:  2001        PMID: 11504727     DOI: 10.1074/jbc.M105387200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  6 in total

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5.  Non-Carbohydrate Glycomimetics as Inhibitors of Calcium(II)-Binding Lectins.

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Review 6.  Atomic Details of Carbon-Based Nanomolecules Interacting with Proteins.

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  6 in total

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