Literature DB >> 11500553

Purification and biochemical properties of phytochromobilin synthase from etiolated oat seedlings.

M T McDowell1, J C Lagarias.   

Abstract

Plant phytochromes are dependent on the covalent attachment of the linear tetrapyrrole chromophore phytochromobilin (P Phi B) for photoactivity. In planta, biliverdin IX alpha (BV) is reduced by the plastid-localized, ferredoxin (Fd)-dependent enzyme P Phi B synthase to yield 3Z-P Phi B. Here, we describe the >50,000-fold purification of P Phi B synthase from etioplasts from dark-grown oat (Avena sativa L. cv Garry) seedlings using traditional column chromatography and preparative electrophoresis. Thus, P Phi B synthase is a very low abundance enzyme with a robust turnover rate. We estimate the turnover rate to be >100 s(-1), which is similar to that of mammalian NAD(P)H-dependent BV reductase. Oat P Phi B synthase is a monomer with a subunit mass of 29 kD. However, two distinct charged forms of the enzymes were identified by native isoelectric focusing. The ability of P Phi B synthase to reduce BV is dependent on reduced 2Fe-2S Fds. A K(m) for spinach (Spinacea oleracea) Fd was determined to be 3 to 4 microM. P Phi B synthase has a high affinity for its bilin substrate, with a sub-micromolar K(m) for BV.

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Year:  2001        PMID: 11500553      PMCID: PMC117154          DOI: 10.1104/pp.126.4.1546

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  30 in total

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Authors:  S J Davis; A V Vener; R D Vierstra
Journal:  Science       Date:  1999-12-24       Impact factor: 47.728

2.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

3.  The Arabidopsis thaliana HY1 locus, required for phytochrome-chromophore biosynthesis, encodes a protein related to heme oxygenases.

Authors:  S J Davis; J Kurepa; R D Vierstra
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

4.  The Arabidopsis HY2 gene encodes phytochromobilin synthase, a ferredoxin-dependent biliverdin reductase.

Authors:  T Kohchi; K Mukougawa; N Frankenberg; M Masuda; A Yokota; J C Lagarias
Journal:  Plant Cell       Date:  2001-02       Impact factor: 11.277

5.  The Arabidopsis photomorphogenic mutant hy1 is deficient in phytochrome chromophore biosynthesis as a result of a mutation in a plastid heme oxygenase.

Authors:  T Muramoto; T Kohchi; A Yokota; I Hwang; H M Goodman
Journal:  Plant Cell       Date:  1999-03       Impact factor: 11.277

6.  Functional genomic analysis of the HY2 family of ferredoxin-dependent bilin reductases from oxygenic photosynthetic organisms.

Authors:  N Frankenberg; K Mukougawa; T Kohchi; J C Lagarias
Journal:  Plant Cell       Date:  2001-04       Impact factor: 11.277

7.  Preparation and properties of crystalline biliverdin IX alpha. Simple methods for preparing isomerically homogeneous biliverdin and [14C[biliverdin by using 2,3-dichloro-5,6-dicyanobenzoquinone.

Authors:  A F McDonagh; L A Palma
Journal:  Biochem J       Date:  1980-08-01       Impact factor: 3.857

8.  Biosynthesis of phycobilins. Ferredoxin-mediated reduction of biliverdin catalyzed by extracts of Cyanidium caldarium.

Authors:  S I Beale; J Cornejo
Journal:  J Biol Chem       Date:  1991-11-25       Impact factor: 5.157

9.  Structure-function studies on phytochrome. Preliminary characterization of highly purified phytochrome from Avena sativa enriched in the 124-kilodalton species.

Authors:  J C Litts; J M Kelly; J C Lagarias
Journal:  J Biol Chem       Date:  1983-09-25       Impact factor: 5.157

10.  Phycobilin biosynthesis: reductant requirements and product identification for heme oxygenase from Cyanidium caldarium.

Authors:  G Rhie; S I Beale
Journal:  Arch Biochem Biophys       Date:  1995-06-20       Impact factor: 4.013

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  6 in total

1.  Genetic engineering of phytochrome biosynthesis in bacteria.

Authors:  G A Gambetta; J C Lagarias
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-11       Impact factor: 11.205

2.  Electrostatic interaction of phytochromobilin synthase and ferredoxin for biosynthesis of phytochrome chromophore.

Authors:  Fang-Yi Chiu; Yu-Rong Chen; Shih-Long Tu
Journal:  J Biol Chem       Date:  2009-12-08       Impact factor: 5.157

3.  The Elm1 (ZmHy2) gene of maize encodes a phytochromobilin synthase.

Authors:  Ruairidh J H Sawers; Philip J Linley; Jose F Gutierrez-Marcos; Teegan Delli-Bovi; Phyllis R Farmer; Takayuki Kohchi; Matthew J Terry; Thomas P Brutnell
Journal:  Plant Physiol       Date:  2004-09-03       Impact factor: 8.340

4.  Comparative Transcriptome Analysis Reveals Effects of Exogenous Hematin on Anthocyanin Biosynthesis during Strawberry Fruit Ripening.

Authors:  Yi Li; Huayin Li; Fengde Wang; Jingjuan Li; Yihui Zhang; Liangju Wang; Jianwei Gao
Journal:  Int J Genomics       Date:  2016-12-15       Impact factor: 2.326

5.  Characterization of Ferredoxin-Dependent Biliverdin Reductase PCYA1 Reveals the Dual Function in Retrograde Bilin Biosynthesis and Interaction With Light-Dependent Protochlorophyllide Oxidoreductase LPOR in Chlamydomonas reinhardtii.

Authors:  Weiqing Zhang; Huan Zhong; Hui Lu; Yuxiang Zhang; Xuan Deng; Kaiyao Huang; Deqiang Duanmu
Journal:  Front Plant Sci       Date:  2018-05-23       Impact factor: 5.753

6.  Crystal structure of the first eukaryotic bilin reductase GtPEBB reveals a flipped binding mode of dihydrobiliverdin.

Authors:  Johannes A Sommerkamp; Nicole Frankenberg-Dinkel; Eckhard Hofmann
Journal:  J Biol Chem       Date:  2019-07-31       Impact factor: 5.157

  6 in total

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