Literature DB >> 11491353

Planomicrobium koreense gen. nov., sp. nov., a bacterium isolated from the Korean traditional fermented seafood jeotgal, and transfer of Planococcus okeanokoites (Nakagawa et al. 1996) and Planococcus mcmeekinii (Junge et al. 1998) to the genus Planomicrobium.

J H Yoon, S S Kang, K C Lee, E S Lee, Y H Kho, K H Kang, Y H Park.   

Abstract

A bacterial strain, JG07T, isolated from the Korean traditional fermented seafood jeotgal, was subjected to a polyphasic taxonomic study. Cells of strain JG07T are cocci or short rods in the early growth phase but change to rods as the cultures age. The peptidoglycan type is A4alpha, based on L-Lys-D-Glu. The menaquinone profile is characterized by the predominance of MK-8 followed by MK-7 and MK-6. The cellular fatty acid profile contains major amounts of saturated, unsaturated and branched fatty acids. The cellular phospholipids are phosphatidylethanolamine, phosphatidylglycerol and bisphosphatidylglycerol. The G+C content of the DNA is 47 mol%. Phylogenetic analysis showed that strain JG07T forms a cluster with Planococcus okeanokoites and Planococcus mcmeekinii, and the relationship between this cluster and two other Planococcus species described previously is supported by bootstrap analysis at a confidence level of 100%. The 16S-23S internally transcribed spacer (ITS) sequence similarity and DNA-DNA relatedness values between strain JG07T and the type strains of other Planococcus species are in the range 74.6-83.2% and 10.4-20.5%, respectively. On the basis of the phenotypic and phylogenetic data and the genomic distinctiveness, strain JG07T is considered to represent a new genus and a new species, for which the name Planomicrobium koreense gen. nov., sp. nov. is proposed. It is also proposed that Planococcus okeanokoites and Planococcus mcmeekinii be transferred to the new genus Planomicrobium as Planomicrobium okeanokoites and Planomicrobium mcmeekinii, respectively.

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Year:  2001        PMID: 11491353     DOI: 10.1099/00207713-51-4-1511

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  9 in total

Review 1.  Taxonomic hierarchy of the phylum Firmicutes and novel Firmicutes species originated from various environments in Korea.

Authors:  Chi Nam Seong; Joo Won Kang; Ji Hee Lee; So Yeon Seo; Jung Jae Woo; Chul Park; Kyung Sook Bae; Mi Sun Kim
Journal:  J Microbiol       Date:  2018-01-04       Impact factor: 3.422

2.  The first case of Planococcus glaciei found in blood, a report from the Czech Republic.

Authors:  Lucia Mališová; Petra Španělová; Ivo Sedláček; Petr Pajer; Martin Musílek; Blanka Puchálková; Vladislav Jakubů; Helena Žemličková; Renáta Šafránková
Journal:  Folia Microbiol (Praha)       Date:  2021-09-30       Impact factor: 2.099

3.  Aerobic biodegradation of HMX by Planomicrobium flavidum.

Authors:  Shilpi Nagar; Ajay Kumar Shaw; Shalini Anand; S Mary Celin; Pramod Kumar Rai
Journal:  3 Biotech       Date:  2018-10-19       Impact factor: 2.406

4.  Draft Genome Sequence of Planomicrobium glaciei UCD-HAM (Phylum Firmicutes).

Authors:  Makayla N Betts; Guillaume Jospin; Jonathan A Eisen; David A Coil
Journal:  Genome Announc       Date:  2015-10-15

5.  Characteristics of Planococcus antioxidans sp. nov., an antioxidant-producing strain isolated from the desert soil in the Qinghai-Tibetan Plateau.

Authors:  Binglin Zhang; Ruiqi Yang; Gaosen Zhang; Yang Liu; Dongming Zhang; Wei Zhang; Tuo Chen; Guangxiu Liu
Journal:  Microbiologyopen       Date:  2020-03-11       Impact factor: 3.139

6.  Robust Demarcation of the Family Caryophanaceae (Planococcaceae) and Its Different Genera Including Three Novel Genera Based on Phylogenomics and Highly Specific Molecular Signatures.

Authors:  Radhey S Gupta; Sudip Patel
Journal:  Front Microbiol       Date:  2020-01-14       Impact factor: 5.640

7.  Phylogenetic relationships between Bacillus species and related genera inferred from 16s rDNA sequences.

Authors:  Mi Sun Wei Wang
Journal:  Braz J Microbiol       Date:  2009-09-01       Impact factor: 2.476

8.  Purification and Characterization of a Protease Produced by a Planomicrobium sp. L-2 from Gut of Octopus vulgaris.

Authors:  Qing Liu; Shujing Sun; Meizi Piao; Ji Young Yang
Journal:  Prev Nutr Food Sci       Date:  2013-12

9.  A primary assessment of the endophytic bacterial community in a xerophilous moss (Grimmia montana) using molecular method and cultivated isolates.

Authors:  Xiao Lei Liu; Su Lin Liu; Min Liu; Bi He Kong; Lei Liu; Yan Hong Li
Journal:  Braz J Microbiol       Date:  2014-05-19       Impact factor: 2.476

  9 in total

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