Literature DB >> 11479324

Using gene knockouts to investigate plant metabolism.

D Thorneycroft1, S M Sherson, S M Smith.   

Abstract

Arabidopsis functional genomics resources now make the isolation of knockout mutants in any gene of choice both realistic and increasingly straightforward. Coupled with the completion of the genome sequence, this reverse genetics approach provides a platform facilitating dramatic progress in our understanding of fundamental aspects of plant metabolism. Recent experience shows that knockouts of genes encoding enzymes of primary metabolism can produce mutants with clear and sometimes unexpected phenotypes. They can provide new information about old pathways. Specific functions for individual members of multigene families can be revealed. Knockouts of enzymes of undefined function can lead to the discovery of those functions, and the analysis of enzymes which have previously never been studied at the biochemical level offers the potential to reveal new pathways of plant metabolism. Furthermore, the mutants isolated provide the starting point for genetic modification experiments to determine exactly how metabolism fuels growth and development, so providing a rational basis for the future modification of plant productivity.

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Year:  2001        PMID: 11479324

Source DB:  PubMed          Journal:  J Exp Bot        ISSN: 0022-0957            Impact factor:   6.992


  11 in total

1.  Differential metabolic networks unravel the effects of silent plant phenotypes.

Authors:  Wolfram Weckwerth; Marcelo Ehlers Loureiro; Kathrin Wenzel; Oliver Fiehn
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-10       Impact factor: 11.205

2.  Non-coordinate expression of peroxisome biogenesis, beta-oxidation and glyoxylate cycle genes in mature Arabidopsis plants.

Authors:  Wayne L Charlton; Barbara Johnson; Ian A Graham; Alison Baker
Journal:  Plant Cell Rep       Date:  2004-09-22       Impact factor: 4.570

3.  Isolation and transcription profiling of low-O2 stress-associated cDNA clones from the flooding-stress-tolerant FR13A rice genotype.

Authors:  Sangeeta Agarwal; Anil Grover
Journal:  Ann Bot       Date:  2005-08-22       Impact factor: 4.357

Review 4.  A review of tobacco BY-2 cells as an excellent system to study the synthesis and function of sterols and other isoprenoids.

Authors:  Andréa Hemmerlin; Esther Gerber; Jean-François Feldtrauer; Laurent Wentzinger; Marie-Andrée Hartmann; Denis Tritsch; Jean-François Hoeffler; Michel Rohmer; Thomas J Bach
Journal:  Lipids       Date:  2004-08       Impact factor: 1.880

5.  Description and interpretation of adaptive evolution of Escherichia coli K-12 MG1655 by using a genome-scale in silico metabolic model.

Authors:  Stephen S Fong; Jennifer Y Marciniak; Bernhard Ø Palsson
Journal:  J Bacteriol       Date:  2003-11       Impact factor: 3.490

6.  Fitness Assays Reveal Incomplete Functional Redundancy of the HoxA1 and HoxB1 Paralogs of Mice.

Authors:  James S Ruff; Raed B Saffarini; Leda L Ramoz; Linda C Morrison; Shambralyn Baker; Sean M Laverty; Petr Tvrdik; Wayne K Potts
Journal:  Genetics       Date:  2015-10       Impact factor: 4.562

7.  Starch synthesis in Arabidopsis. Granule synthesis, composition, and structure.

Authors:  Samuel C Zeeman; Axel Tiessen; Emma Pilling; K Lisa Kato; Athene M Donald; Alison M Smith
Journal:  Plant Physiol       Date:  2002-06       Impact factor: 8.340

8.  Isocitrate lyase plays important roles in plant salt tolerance.

Authors:  Worawat Yuenyong; Supaart Sirikantaramas; Li-Jia Qu; Teerapong Buaboocha
Journal:  BMC Plant Biol       Date:  2019-11-06       Impact factor: 4.215

9.  Chemogenomic profiling of Plasmodium falciparum as a tool to aid antimalarial drug discovery.

Authors:  Anupam Pradhan; Geoffrey H Siwo; Naresh Singh; Brian Martens; Bharath Balu; Katrina A Button-Simons; Asako Tan; Min Zhang; Kenneth O Udenze; Rays H Y Jiang; Michael T Ferdig; John H Adams; Dennis E Kyle
Journal:  Sci Rep       Date:  2015-11-06       Impact factor: 4.379

Review 10.  Prospects of Gene Knockouts in the Functional Study of MAMP-Triggered Immunity: A Review.

Authors:  Benedict C Offor; Ian A Dubery; Lizelle A Piater
Journal:  Int J Mol Sci       Date:  2020-04-06       Impact factor: 5.923

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