Literature DB >> 11477221

How does heme axial ligand deletion affect the structure and the function of cytochrome b(562)?

N Kamiya1, Y Okimoto, Z Ding, H Ohtomo, M Shimizu, A Kitayama, H Morii, T Nagamune.   

Abstract

We have recently generated a new mutant of cytochrome b(562) (cytb(562)) in which Met7, one of the axial heme ligands, is replaced by Ala (M7A cytb(562)). The M7A cytb(562) can bind heme and the UV-visible absorption spectrum is of a typical high-spin ferric heme. To investigate the effect of the lack of Met7 ligation on the structural integrity of cytb(562), thermal transition analyses of M7A cytb(562) were conducted. From the thermodynamic parameters obtained, it is concluded that the folding of M7A cytb(562) is comparable to the apoprotein despite the presence of heme. On the other hand, exogenous ligands such as cyanide and azide ions are readily bound to the heme iron, indicating that the axial coordination site is available for substrate binding. The peroxidase activity of this mutant is thus examined to evaluate new enzymatic function at this site and M7A cytb(562) was found to catalyze an oxidation reaction of aromatic substrates with hydrogen peroxide. These observations demonstrate that the Met7/His102 bis-ligation to the heme iron is crucial for the stable folding of cytb(562), whereas the functional conversion of cytb(562) is successfully achieved by the loose folding together with the open coordination site.

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Year:  2001        PMID: 11477221     DOI: 10.1093/protein/14.6.415

Source DB:  PubMed          Journal:  Protein Eng        ISSN: 0269-2139


  5 in total

1.  Characterization of two cytochrome b6 proteins from the cyanobacterium Gloeobacter violaceus PCC 7421.

Authors:  Carolin Dreher; Ruth Hielscher; Alexander Prodöhl; Petra Hellwig; Dirk Schneider
Journal:  J Bioenerg Biomembr       Date:  2010-03-18       Impact factor: 2.945

2.  The HP-1 maquette: from an apoprotein structure to a structured hemoprotein designed to promote redox-coupled proton exchange.

Authors:  Steve S Huang; Ronald L Koder; Mitchell Lewis; A Joshua Wand; P Leslie Dutton
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-31       Impact factor: 11.205

3.  A novel heme-regulatory motif mediates heme-dependent degradation of the circadian factor period 2.

Authors:  Jianhua Yang; Kevin D Kim; Andrew Lucas; Karen E Drahos; Carlo S Santos; Sean P Mury; Daniel G S Capelluto; Carla V Finkielstein
Journal:  Mol Cell Biol       Date:  2008-05-27       Impact factor: 4.272

Review 4.  Structural and thermodynamic consequences of b heme binding for monomeric apoglobins and other apoproteins.

Authors:  Daniel A Landfried; David A Vuletich; Matthew P Pond; Juliette T J Lecomte
Journal:  Gene       Date:  2007-05-01       Impact factor: 3.688

5.  Light-Driven CO2 Reduction by Co-Cytochrome b 562.

Authors:  Rafael Alcala-Torano; Nicholas Halloran; Noah Gwerder; Dayn J Sommer; Giovanna Ghirlanda
Journal:  Front Mol Biosci       Date:  2021-04-15
  5 in total

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