Literature DB >> 11475532

The genome as a drug target: sequence specific minor groove binding ligands.

P R Turner1, W A Denny.   

Abstract

The ability to target defined sequences on the DNA molecule would be of enormous benefit to the treatment of human disease. Towards this goal much research has been invested in examining the DNA binding and biological mechanisms of action of sequence selective minor groove binding ligands. These compounds act in a variety of ways to inhibit gene expression and DNA replication and also alter nuclear architecture. Concomitant with this, minor groove adducts formed by certain compounds are inefficiently removed by cellular DNA repair systems and are extremely cytotoxic. Additionally compounds targeting A.T rich DNA sequences have found clinical use in the treatment of particular parasitic infections.

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Year:  2000        PMID: 11475532     DOI: 10.2174/1389450003349407

Source DB:  PubMed          Journal:  Curr Drug Targets        ISSN: 1389-4501            Impact factor:   3.465


  9 in total

1.  Sequence-specific recognition of DNA minor groove by an NIR-fluorescence switch-on probe and its potential applications.

Authors:  Nagarjun Narayanaswamy; Shubhajit Das; Pralok K Samanta; Khadija Banu; Guru Prasad Sharma; Neelima Mondal; Suman K Dhar; Swapan K Pati; T Govindaraju
Journal:  Nucleic Acids Res       Date:  2015-09-08       Impact factor: 16.971

2.  Molecular mechanism of inhibition of survivin transcription by the GC-rich sequence-selective DNA binding antitumor agent, hedamycin: evidence of survivin down-regulation associated with drug sensitivity.

Authors:  Jianguo Wu; Xiang Ling; Dalin Pan; Pasha Apontes; Lei Song; Ping Liang; Dario C Altieri; Terry Beerman; Fengzhi Li
Journal:  J Biol Chem       Date:  2005-01-05       Impact factor: 5.157

Review 3.  Antiparasitic compounds that target DNA.

Authors:  W David Wilson; Farial A Tanious; Amanda Mathis; Denise Tevis; James Edwin Hall; David W Boykin
Journal:  Biochimie       Date:  2008-03-04       Impact factor: 4.079

4.  Structural and energetic insights into sequence-specific interaction in DNA-drug recognition: development of affinity predictor and analysis of binding selectivity.

Authors:  Jingheng Ning; Weiwei Chen; Jiaojiao Li; Zaixi Peng; Jianhui Wang; Zhong Ni
Journal:  J Mol Model       Date:  2012-12-29       Impact factor: 1.810

5.  The hybridization-stabilization assay: a solution-based isothermal method for rapid screening and determination of sequence preference of ligands that bind to duplexed nucleic acids.

Authors:  C Gonzalez; M Moore; S Ribeiro; U Schmitz; G P Schroth; L Turin; T W Bruice
Journal:  Nucleic Acids Res       Date:  2001-08-15       Impact factor: 16.971

6.  New insight into the molecular mechanisms of the biological effects of DNA minor groove binders.

Authors:  Xinbo Zhang; Siyu Crystal Zhang; Dejun Sun; Jiang Hu; Anil Wali; Harvey Pass; Felix Fernandez-Madrid; Michael R Harbut; Naimei Tang
Journal:  PLoS One       Date:  2011-10-05       Impact factor: 3.240

7.  Minor grove binding ligands disrupt PARP-1 activation pathways.

Authors:  Kirill I Kirsanov; Elena Kotova; Petr Makhov; Konstantin Golovine; Ekaterina A Lesovaya; Vladimir M Kolenko; Marianna G Yakubovskaya; Alexei V Tulin
Journal:  Oncotarget       Date:  2014-01-30

8.  Impact of pyrrolidine-bispyrrole DNA minor groove binding agents and chirality on global proteomic profile in Escherichia Coli.

Authors:  Ya-Ting Yang; Chun-Yu Lin; Jingyueh Jeng; Chi-Wi Ong
Journal:  Proteome Sci       Date:  2013-05-23       Impact factor: 2.480

9.  Microarray analysis of the in vivo sequence preferences of a minor groove binding drug.

Authors:  Todd T Eckdahl; Adam D Brown; Steven N Hart; Kelly J Malloy; Martha Shott; Gloria Yiu; Laura L Mays Hoopes; Laurie J Heyer
Journal:  BMC Genomics       Date:  2008-01-23       Impact factor: 3.969

  9 in total

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