Literature DB >> 11475326

Characterization of four extensin genes in Arabidopsis thaliana by differential gene expression under stress and non-stress conditions.

Y Yoshiba1, C Aoki, S Iuchi, T Nanjo, M Seki, F Sekiguchi, K Yamaguchi-Shinozaki, K Shinozaki.   

Abstract

From Arabidopsis thaliana we isolated four different cDNAs that encode extensins, a family of cell-wall hydroxyproline-rich glycoproteins (HRGPs). Putative proteins (AtExt2-5) contained one open reading frame and characteristic Ser-(Pro)4 sequences organized in a high-order repetitive motif. AtExt2-5 genes were strongly expressed during rehydration after dehydration. They were also expressed after treatment with various amino acids. In particular, AtExt3 and five mRNAs were abundantly accumulated after treatment with L-Ser, Hyp, and L-Pro, which are major components of extensin proteins. The AtExt transcripts were strongly expressed in root tissues of both unbolted and bolted plants. The transcripts of AtExt2, 3, and 5 were also detected in the lower stem and flower buds, and that of AtExt4 was detected in bolted flowers. Therefore, we suggest that these four AtExt genes are novel extensin genes in A. thaliana, because the expression of atExt1, which has already been isolated from A. thaliana, was different from these.

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Year:  2001        PMID: 11475326     DOI: 10.1093/dnares/8.3.115

Source DB:  PubMed          Journal:  DNA Res        ISSN: 1340-2838            Impact factor:   4.458


  5 in total

1.  A bioinformatics approach to the identification, classification, and analysis of hydroxyproline-rich glycoproteins.

Authors:  Allan M Showalter; Brian Keppler; Jens Lichtenberg; Dazhang Gu; Lonnie R Welch
Journal:  Plant Physiol       Date:  2010-04-15       Impact factor: 8.340

2.  Identification of Novel Peptidyl Serine α-Galactosyltransferase Gene Family in Plants.

Authors:  Fumie Saito; Akiko Suyama; Takuji Oka; Takehiko Yoko-O; Ken Matsuoka; Yoshifumi Jigami; Yoh-Ichi Shimma
Journal:  J Biol Chem       Date:  2014-06-09       Impact factor: 5.157

3.  Bioinformatic Identification and Analysis of Extensins in the Plant Kingdom.

Authors:  Xiao Liu; Richard Wolfe; Lonnie R Welch; David S Domozych; Zoë A Popper; Allan M Showalter
Journal:  PLoS One       Date:  2016-02-26       Impact factor: 3.240

4.  Identification and functional validation of a unique set of drought induced genes preferentially expressed in response to gradual water stress in peanut.

Authors:  Geetha Govind; Vokkaliga ThammeGowda Harshavardhan; Harshavardhan Vokkaliga ThammeGowda; Jayaker Kalaiarasi Patricia; Patricia Jayaker Kalaiarasi; Ramachandra Dhanalakshmi; Dhanalakshmi Ramchandra Iyer; Muthappa Senthil Kumar; Senthil Kumar Muthappa; Nese Sreenivasulu; Sreenivasulu Nese; Makarla Udayakumar; Udaya Kumar Makarla
Journal:  Mol Genet Genomics       Date:  2009-02-18       Impact factor: 3.291

5.  Hydrogen cyanamide breaks grapevine bud dormancy in the summer through transient activation of gene expression and accumulation of reactive oxygen and nitrogen species.

Authors:  Boonyawat Sudawan; Chih-Sheng Chang; Hsiu-Fung Chao; Maurice S B Ku; Yung-Fu Yen
Journal:  BMC Plant Biol       Date:  2016-09-15       Impact factor: 4.215

  5 in total

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