Literature DB >> 11474168

Classifying by colors: FISH-based genome analysis.

C Fauth1, M R Speicher.   

Abstract

In recent years a fascinating evolution of different multicolor fluorescence in situ hybridization (FISH) technologies could be witnessed. The various approaches to cohybridize multiple DNA probes in different colors opened new avenues for FISH-based automated karyotyping or the simultaneous analysis of multiple defined regions within the genome. These developments had a remarkable impact on microscopy design and the usage of highly sensitive area imagers. In addition, they led to the introduction of new fluorochromes with appropriate filter combinations, refinements of hybridization protocols, novel probe sets, and innovative software for automated chromosome analysis. This paper attempts to summarize the various multicolor approaches and discusses the application of the individual technologies. Copyright 2001 S. Karger AG, Basel

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Year:  2001        PMID: 11474168     DOI: 10.1159/000056937

Source DB:  PubMed          Journal:  Cytogenet Cell Genet        ISSN: 0301-0171


  7 in total

1.  High-resolution comparative chromosome painting in the Arizona collared peccary (Pecari tajacu, Tayassuidae): a comparison with the karyotype of pig and sheep.

Authors:  Filomena Adega; Raquel Chaves; Andrea Kofler; Paul R Krausman; Julio Masabanda; Johannes Wienberg; Henrique Guedes-Pinto
Journal:  Chromosome Res       Date:  2006-04-20       Impact factor: 5.239

Review 2.  Multicolor chromosome painting in diagnostic and research applications.

Authors:  Sabine Langer; Jürgen Kraus; Isabell Jentsch; Michael R Speicher
Journal:  Chromosome Res       Date:  2004       Impact factor: 5.239

Review 3.  Integrating physical and genetic maps: from genomes to interaction networks.

Authors:  Andreas Beyer; Sourav Bandyopadhyay; Trey Ideker
Journal:  Nat Rev Genet       Date:  2007-09       Impact factor: 53.242

4.  3D-FISH Analysis of the Spatial Genome Organization in Skin Cells in Situ.

Authors:  Andrei N Mardaryev; Michael Y Fessing
Journal:  Methods Mol Biol       Date:  2020

5.  Deciphering squamous cell carcinoma using multidimensional genomic approaches.

Authors:  Ewan A Gibb; Katey S S Enfield; Ivy F L Tsui; Raj Chari; Stephen Lam; Carlos E Alvarez; Wan L Lam
Journal:  J Skin Cancer       Date:  2010-12-27

6.  American College of Medical Genetics guideline on the cytogenetic evaluation of the individual with developmental delay or mental retardation.

Authors:  Lisa G Shaffer
Journal:  Genet Med       Date:  2005 Nov-Dec       Impact factor: 8.822

7.  ChromaWizard: An open source image analysis software for multicolor fluorescence in situ hybridization analysis.

Authors:  Norbert Auer; Astrid Hrdina; Chaitra Hiremath; Sabine Vcelar; Martina Baumann; Nicole Borth; Vaibhav Jadhav
Journal:  Cytometry A       Date:  2018-08-08       Impact factor: 4.355

  7 in total

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