Literature DB >> 11467968

Temperature-induced denaturation and renaturation of triosephosphate isomerase from Saccharomyces cerevisiae: evidence of dimerization coupled to refolding of the thermally unfolded protein.

C G Benítez-Cardoza1, A Rojo-Domínguez, A Hernández-Arana.   

Abstract

The thermal denaturation of the dimeric enzyme triosephosphate isomerase (TIM) from Saccharomyces cerevisiae was studied by spectroscopic and calorimetric methods. At low protein concentration the structural transition proved to be reversible in thermal scannings conducted at a rate greater than 1.0 degrees C min(-1). Under these conditions, however, the denaturation-renaturation cycle exhibited marked hysteresis. The use of lower scanning rates lead to pronounced irreversibility. Kinetic studies indicated that denaturation of the enzyme likely consists of an initial first-order reaction that forms thermally unfolded (U) TIM, followed by irreversibility-inducing reactions which are probably linked to aggregation of the unfolded protein. As judged from CD measurements, U possesses residual secondary structure but lacks most of the tertiary interactions present in native TIM. Furthermore, the large increment in heat capacity upon denaturation suggests that extensive exposure of surface area occurs when U is formed. Above 63 degrees C, reactions leading to irreversibility were much slower than the unfolding process; as a result, U was sufficiently long-lived as to allow an investigation of its refolding kinetics. We found that U transforms into nativelike TIM through a second-order reaction in which association is coupled to the regain of secondary structure. The rate constants for unfolding and refolding of TIM displayed temperature dependences resembling those reported for monomeric proteins but with considerably larger activation enthalpies. Such large temperature dependences seem to be determinant for the occurrence of kinetically controlled transitions and thus constitute a simple explanation for the hysteresis observed in thermal scannings.

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Year:  2001        PMID: 11467968     DOI: 10.1021/bi010528w

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  19 in total

1.  Thermodynamic characterization of yeast triosephosphate isomerase refolding: insights into the interplay between function and stability as reasons for the oligomeric nature of the enzyme.

Authors:  Hugo Nájera; Miguel Costas; D Alejandro Fernández-Velasco
Journal:  Biochem J       Date:  2003-03-15       Impact factor: 3.857

2.  Folding and unfolding of gammaTIM monomers and dimers.

Authors:  Brijesh Patel; John M Finke
Journal:  Biophys J       Date:  2007-06-01       Impact factor: 4.033

3.  The rough energy landscape of superfolder GFP is linked to the chromophore.

Authors:  Benjamin T Andrews; Andrea R Schoenfish; Melinda Roy; Geoffrey Waldo; Patricia A Jennings
Journal:  J Mol Biol       Date:  2007-08-15       Impact factor: 5.469

4.  Thermodynamic and kinetic stability of a large multi-domain enzyme from the hyperthermophile Aeropyrum pernix.

Authors:  Mikael Karlström; Roberta Chiaraluce; Laura Giangiacomo; Ida Helene Steen; Nils-Kåre Birkeland; Rudolf Ladenstein; Valerio Consalvi
Journal:  Extremophiles       Date:  2010-03       Impact factor: 2.395

5.  Equilibrium and kinetic folding pathways of a TIM barrel with a funneled energy landscape.

Authors:  John M Finke; José N Onuchic
Journal:  Biophys J       Date:  2005-04-15       Impact factor: 4.033

6.  Consensus protein engineering on the thermostable histone-like bacterial protein HUs significantly improves stability and DNA binding affinity.

Authors:  Anastasios Georgoulis; Maria Louka; Stratos Mylonas; Philemon Stavros; George Nounesis; Constantinos E Vorgias
Journal:  Extremophiles       Date:  2020-01-24       Impact factor: 2.395

7.  Thermal-unfolding reaction of triosephosphate isomerase from Trypanosoma cruzi.

Authors:  Edgar Mixcoha-Hernández; Liliana M Moreno-Vargas; Arturo Rojo-Domínguez; Claudia G Benítez-Cardoza
Journal:  Protein J       Date:  2007-10       Impact factor: 2.371

8.  The stability of the archaeal HU histone-like DNA-binding protein from Thermoplasma volcanium.

Authors:  Fotini Orfaniotou; Pavlos Tzamalis; Angelos Thanassoulas; Eleni Stefanidi; Athanassios Zees; Effrosini Boutou; Metaxia Vlassi; George Nounesis; Constantinos E Vorgias
Journal:  Extremophiles       Date:  2008-09-26       Impact factor: 2.395

9.  Hysteresis as a Marker for Complex, Overlapping Landscapes in Proteins.

Authors:  Benjamin T Andrews; Dominique T Capraro; Joanna I Sulkowska; José N Onuchic; Patricia A Jennings
Journal:  J Phys Chem Lett       Date:  2012-12-18       Impact factor: 6.475

10.  Thermal stability of the human immunodeficiency virus type 1 (HIV-1) receptors, CD4 and CXCR4, reconstituted in proteoliposomes.

Authors:  Mikhail A Zhukovsky; Stéphane Basmaciogullari; Beatriz Pacheco; Liping Wang; Navid Madani; Hillel Haim; Joseph Sodroski
Journal:  PLoS One       Date:  2010-10-13       Impact factor: 3.240

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