Literature DB >> 11467434

The one that did not get away: individual assignment using microsatellite data detects a case of fishing competition fraud.

C R Primmer1, M T Koskinen, J Piironen.   

Abstract

Assignment of an individual to the population from which it most probably originated based on its multilocus genotype has been widely applied in recent years. In this study, individual assignment based on microsatellite data was used to identify a case of fishing competition fraud. Despite the fact that the true population of origin was most probably not among the reference populations, recent modifications of the assignment tests were used in confidently excluding (p < 0.0001) the possibility of a 5.5 kg salmon (Salmo salar) originating from the fishing competition location, Lake Saimaa (south-east Finland). In fact, the probability of the suspect salmon originating from one of the regions that supply most of Finland's fish markets was found to be over 600 times higher than it originating from Lake Saimaa. When presented with this evidence, the offender confessed to purchasing the salmon at a local fish shop and criminal charges were laid. This study emphasizes the potential practical application of the individual assignment procedure, in particular the usefulness of confidently excluding populations as the origin of an individual. A similar strategy could be also used, for example in suspected cases of illegal poaching, in order to assign or exclude individuals from originating from a claimed population.

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Year:  2000        PMID: 11467434      PMCID: PMC1690726          DOI: 10.1098/rspb.2000.1197

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  8 in total

1.  Potential of microsatellites for individual assignment: the North Atlantic redfish (genus Sebastes) species complex as a case study.

Authors:  S Roques; P Duchesne; L Bernatchez
Journal:  Mol Ecol       Date:  1999-10       Impact factor: 6.185

2.  New methods employing multilocus genotypes to select or exclude populations as origins of individuals.

Authors:  J M Cornuet; S Piry; G Luikart; A Estoup; M Solignac
Journal:  Genetics       Date:  1999-12       Impact factor: 4.562

3.  Determining the source of individuals: multilocus genotyping in nonequilibrium population genetics.

Authors: 
Journal:  Trends Ecol Evol       Date:  1999-01       Impact factor: 17.712

4.  Detecting immigration by using multilocus genotypes.

Authors:  B Rannala; J L Mountain
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-19       Impact factor: 11.205

5.  Polymorphic Atlantic salmon, Salmo salar L., microsatellites at the SSOSL438, SSOSL439 and SSOSL444 loci.

Authors:  A Slettan; I Olsaker; O Lie
Journal:  Anim Genet       Date:  1996-02       Impact factor: 3.169

Review 6.  A unified approach to study hypervariable polymorphisms: statistical considerations of determining relatedness and population distances.

Authors:  R Chakraborty; L Jin
Journal:  EXS       Date:  1993

7.  Phylogenetic analysis. Models and estimation procedures.

Authors:  L L Cavalli-Sforza; A W Edwards
Journal:  Am J Hum Genet       Date:  1967-05       Impact factor: 11.025

8.  Microsatellite analysis of population structure in Canadian polar bears.

Authors:  D Paetkau; W Calvert; I Stirling; C Strobeck
Journal:  Mol Ecol       Date:  1995-06       Impact factor: 6.185

  8 in total
  16 in total

1.  Empirical evaluation of genetic clustering methods using multilocus genotypes from 20 chicken breeds.

Authors:  N A Rosenberg; T Burke; K Elo; M W Feldman; P J Freidlin; M A Groenen; J Hillel; A Mäki-Tanila; M Tixier-Boichard; A Vignal; K Wimmers; S Weigend
Journal:  Genetics       Date:  2001-10       Impact factor: 4.562

2.  Assessing probability of ancestry using simple sequence repeat profiles: applications to maize hybrids and inbreds.

Authors:  Donald A Berry; Jon D Seltzer; Chongqing Xie; Deanne L Wright; J Stephen C Smith
Journal:  Genetics       Date:  2002-06       Impact factor: 4.562

3.  Informativeness of genetic markers for inference of ancestry.

Authors:  Noah A Rosenberg; Lei M Li; Ryk Ward; Jonathan K Pritchard
Journal:  Am J Hum Genet       Date:  2003-11-20       Impact factor: 11.025

4.  Heterogeneity in stable isotope profiles predicts coexistence of populations of barn swallows Hirundo rustica differing in morphology and reproductive performance.

Authors:  Anders Pape Møller; Keith A Hobson
Journal:  Proc Biol Sci       Date:  2004-07-07       Impact factor: 5.349

5.  DNA sequence analysis to guide the release of blue-and-yellow macaws (Ara ararauna, Psittaciformes, Aves) from the illegal trade back into the wild.

Authors:  Gislaine A Fernandes; Renato Caparroz
Journal:  Mol Biol Rep       Date:  2012-11-27       Impact factor: 2.316

6.  Molecular genetic analysis of stomach contents reveals wild Atlantic cod feeding on piscine reovirus (PRV) infected Atlantic salmon originating from a commercial fish farm.

Authors:  Kevin Alan Glover; Anne Grete Eide Sørvik; Egil Karlsbakk; Zhiwei Zhang; Øystein Skaala
Journal:  PLoS One       Date:  2013-04-19       Impact factor: 3.240

7.  Forensic identification of severely degraded Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss) tissues.

Authors:  Sussie Dalvin; Kevin A Glover; Anne Ge Sørvik; Bjørghild B Seliussen; John B Taggart
Journal:  Investig Genet       Date:  2010-11-03

8.  Shape based assignment tests suggest transgressive phenotypes in natural sculpin hybrids (Teleostei, Scorpaeniformes, Cottidae).

Authors:  Arne W Nolte; H David Sheets
Journal:  Front Zool       Date:  2005-06-29       Impact factor: 3.172

9.  A comparison of SNP and STR loci for delineating population structure and performing individual genetic assignment.

Authors:  Kevin A Glover; Michael M Hansen; Sigbjørn Lien; Thomas D Als; Bjørn Høyheim; Oystein Skaala
Journal:  BMC Genet       Date:  2010-01-06       Impact factor: 2.797

10.  Sequence determinants of human microsatellite variability.

Authors:  Trevor J Pemberton; Conner I Sandefur; Mattias Jakobsson; Noah A Rosenberg
Journal:  BMC Genomics       Date:  2009-12-16       Impact factor: 3.969

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