Literature DB >> 11466976

Wrapping and interoperating bioinformatics resources using CORBA.

R Stevens1, C Miller.   

Abstract

Bioinformaticians seeking to provide services to working biologists are faced with the twin problems of distribution and diversity of resources. Bioinformatics databases are distributed around the world and exist in many kinds of storage forms, platforms and access paradigms. To provide adequate services to biologists, these distributed and diverse resources have to interoperate seamlessly within single applications. The Common Object Request Broker Architecture (CORBA) offers one technical solution to these problems. The key component of CORBA is its use of object orientation as an intermediate form to translate between different representations. This paper concentrates on an explanation of object orientation and how it can be used to overcome the problems of distribution and diversity by describing the interfaces between objects.

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Year:  2000        PMID: 11466976     DOI: 10.1093/bib/1.1.9

Source DB:  PubMed          Journal:  Brief Bioinform        ISSN: 1467-5463            Impact factor:   11.622


  4 in total

1.  RNAML: a standard syntax for exchanging RNA information.

Authors:  Allison Waugh; Patrick Gendron; Russ Altman; James W Brown; David Case; Daniel Gautheret; Stephen C Harvey; Neocles Leontis; John Westbrook; Eric Westhof; Michael Zuker; François Major
Journal:  RNA       Date:  2002-06       Impact factor: 4.942

2.  Dynamic integration of biological data sources using the data concierge.

Authors:  Peng Gong
Journal:  Health Inf Sci Syst       Date:  2013-02-04

3.  Francisella tularensis novicida proteomic and transcriptomic data integration and annotation based on semantic web technologies.

Authors:  Nadia Anwar; Ela Hunt
Journal:  BMC Bioinformatics       Date:  2009-10-01       Impact factor: 3.169

4.  Knowledge Beacons: Web services for data harvesting of distributed biomedical knowledge.

Authors:  Lance M Hannestad; Vlado Dančík; Meera Godden; Imelda W Suen; Kenneth C Huellas-Bruskiewicz; Benjamin M Good; Christopher J Mungall; Richard M Bruskiewich
Journal:  PLoS One       Date:  2021-03-23       Impact factor: 3.240

  4 in total

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