Literature DB >> 11465024

Getting started with Acedb.

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Abstract

Acedb is one of the more venerable pieces of Genomics software. Acedb was originally created in 1992 by Richard Durbin and Jean Thierry-Mieg to manage the data from the Caenorhabditis elegans mapping project and subsequently the C. elegans sequencing project. From beginnings as a C. elegans-specific tool, it has been continuously developed into a flexible suite of data management, display and scripting tools providing facilities for managing and annotation mapping information and DNA and peptide sequences. This paper gives a basic overview of the Acedb suite, and step-by-step guidance on how to download and install Acedb. It is intended to take an Acedb novice to stage where they can begin to experiment and explore the facilities that are available.

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Year:  2000        PMID: 11465024     DOI: 10.1093/bib/1.2.131

Source DB:  PubMed          Journal:  Brief Bioinform        ISSN: 1467-5463            Impact factor:   11.622


  2 in total

1.  The human genome browser at UCSC.

Authors:  W James Kent; Charles W Sugnet; Terrence S Furey; Krishna M Roskin; Tom H Pringle; Alan M Zahler; David Haussler
Journal:  Genome Res       Date:  2002-06       Impact factor: 9.043

2.  TropGeneDB, the multi-tropical crop information system updated and extended.

Authors:  Chantal Hamelin; Guilhem Sempere; Vincent Jouffe; Manuel Ruiz
Journal:  Nucleic Acids Res       Date:  2012-11-17       Impact factor: 16.971

  2 in total

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