Literature DB >> 11463618

Probing the origins of increased activity of the E22Q "Dutch" mutant Alzheimer's beta-amyloid peptide.

F Massi1, J E Straub.   

Abstract

The amyloid peptide congener A beta(10--35)-NH(2) is simulated in an aqueous environment in both the wild type (WT) and E22Q "Dutch" mutant forms. The origin of the noted increase in deposition activity resulting from the Dutch mutation is investigated. Multiple nanosecond time scale molecular dynamics trajectories were performed and analyzed using a variety of measures of the peptide's average structure, hydration, conformational fluctuations, and dynamics. The results of the study support the conclusions that 1) the E22Q mutant and WT peptide are both stable in "collapsed coil" conformations consistent with the WT structure of, J. Struct. Biol. 130:130--141); 2) the E22Q peptide is more flexible in solution, supporting early claims that its equilibrium structural fluctuations are larger than those of the WT peptide; and 3) the local E22Q mutation leads to a change in the first solvation layer in the region of the peptide's "hydrophobic patch," resulting in a more hydrophobic solvation of the mutant peptide. The simulation results support the view that the noted increase in activity due to the Dutch mutation results from an enhancement of the desolvation process that is an essential step in the aggregation of the peptide.

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Year:  2001        PMID: 11463618      PMCID: PMC1301546          DOI: 10.1016/S0006-3495(01)75734-7

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  23 in total

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2.  Substitutions at codon 22 of Alzheimer's abeta peptide induce diverse conformational changes and apoptotic effects in human cerebral endothelial cells.

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3.  The effect of vicinal polar and charged groups on hydrophobic hydration.

Authors:  Y K Cheng; P J Rossky
Journal:  Biopolymers       Date:  1999-12       Impact factor: 2.505

4.  Hydrophobic hydration of amphipathic peptides.

Authors:  Y K Cheng; W S Sheu; P J Rossky
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

5.  Simulation study of the structure and dynamics of the Alzheimer's amyloid peptide congener in solution.

Authors:  F Massi; J W Peng; J P Lee; J E Straub
Journal:  Biophys J       Date:  2001-01       Impact factor: 4.033

6.  The interpretation of protein structures: estimation of static accessibility.

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Journal:  J Mol Biol       Date:  1971-02-14       Impact factor: 5.469

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8.  Activation barriers to structural transition determine deposition rates of Alzheimer's disease a beta amyloid.

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9.  The Alzheimer's peptide a beta adopts a collapsed coil structure in water.

Authors:  S Zhang; K Iwata; M J Lachenmann; J W Peng; S Li; E R Stimson; Y Lu; A M Felix; J E Maggio; J P Lee
Journal:  J Struct Biol       Date:  2000-06       Impact factor: 2.867

10.  Oligomerization of beta-amyloid of the Alzheimer's and the Dutch-cerebral-haemorrhage types.

Authors:  A K Sian; E R Frears; O M El-Agnaf; B P Patel; M F Manca; G Siligardi; R Hussain; B M Austen
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  20 in total

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3.  Association thermodynamics and conformational stability of beta-sheet amyloid beta(17-42) oligomers: effects of E22Q (Dutch) mutation and charge neutralization.

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4.  Solvent and mutation effects on the nucleation of amyloid beta-protein folding.

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5.  Spontaneous fibril formation by polyalanines; discontinuous molecular dynamics simulations.

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6.  Benchmarking implicit solvent folding simulations of the amyloid beta(10-35) fragment.

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Review 7.  Computational simulations of the early steps of protein aggregation.

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Journal:  Prion       Date:  2007-01-05       Impact factor: 3.931

8.  Effect of the Tottori familial disease mutation (D7N) on the monomers and dimers of Aβ40 and Aβ42.

Authors:  Man Hoang Viet; Phuong H Nguyen; Son Tung Ngo; Mai Suan Li; Philippe Derreumaux
Journal:  ACS Chem Neurosci       Date:  2013-09-16       Impact factor: 4.418

9.  Comparative fibril formation of analogs corresponding to the (12-24) segment of the β-amyloid peptide.

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Journal:  Neurol Sci       Date:  2011-09-09       Impact factor: 3.307

10.  Elucidation of amyloid beta-protein oligomerization mechanisms: discrete molecular dynamics study.

Authors:  B Urbanc; M Betnel; L Cruz; G Bitan; D B Teplow
Journal:  J Am Chem Soc       Date:  2010-03-31       Impact factor: 15.419

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