Literature DB >> 11462218

An evolutionary model for the origin of non-randomness, long-range order and fractality in the genome.

Y Almirantis1, A Provata.   

Abstract

We present a model for genome evolution, comprising biologically plausible events such as transpositions inside the genome and insertions of exogenous sequences. This model attempts to formulate a minimal proposition accounting for key statistical properties of genomes, avoiding, as far as possible, unsupportable hypotheses for the remote evolutionary past. The statistical properties that are observed in genomic sequences and are reproduced by the proposed model are: (i) deviations from randomness at different length scales, measured by suitable algorithms, (ii) a special form of size distribution (power law distribution) characterising different levels of genome organisation in the non-coding, and (iii) extensive resemblance in the alternation of coding and non-coding regions at several length scales (self-similarity) in long genomic sequences of higher eukaryotes. Copyright 2001 John Wiley & Sons, Inc.

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Year:  2001        PMID: 11462218     DOI: 10.1002/bies.1090

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  2 in total

1.  "Word" preference in the genomic text and genome evolution: different modes of n-tuplet usage in coding and noncoding sequences.

Authors:  Christoforos Nikolaou; Yannis Almirantis
Journal:  J Mol Evol       Date:  2005-07-19       Impact factor: 2.395

2.  Compressing proteomes: the relevance of medium range correlations.

Authors:  Dario Benedetto; Emanuele Caglioti; Claudia Chica
Journal:  EURASIP J Bioinform Syst Biol       Date:  2007
  2 in total

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