Literature DB >> 11462052

Retroviral splicing suppressor requires three nonconsensus uridines in a 5' splice site-like sequence.

R E Paca1, C S Hibbert, C T O'Sullivan, K L Beemon.   

Abstract

Rous sarcoma virus RNA contains a negative regulator of splicing (NRS) element that aids in maintenance of unspliced RNA. The NRS binds U1 snRNA at a sequence that deviates from the 5' splice site consensus by substitution of U's for A's at three positions: -2, +3, and +4. All three of these U's are important for NRS-mediated splicing suppression. Substitution of a single nonconsensus C or G at any of these sites diminished NRS activity, whereas substitution of a single A generated a preferred 5' splice site within the NRS.

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Year:  2001        PMID: 11462052      PMCID: PMC115015          DOI: 10.1128/JVI.75.16.7763-7768.2001

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  18 in total

1.  The role of overlapping U1 and U11 5' splice site sequences in a negative regulator of splicing.

Authors:  C S Hibbert; R R Gontarek; K L Beemon
Journal:  RNA       Date:  1999-03       Impact factor: 4.942

2.  Stabilities of consecutive A.C, C.C, G.G, U.C, and U.U mismatches in RNA internal loops: Evidence for stable hydrogen-bonded U.U and C.C.+ pairs.

Authors:  J SantaLucia; R Kierzek; D H Turner
Journal:  Biochemistry       Date:  1991-08-20       Impact factor: 3.162

3.  Control of retroviral RNA splicing through maintenance of suboptimal processing signals.

Authors:  R A Katz; A M Skalka
Journal:  Mol Cell Biol       Date:  1990-02       Impact factor: 4.272

4.  Multiple regions in the Rous sarcoma virus src gene intron act in cis to affect the accumulation of unspliced RNA.

Authors:  C M Stoltzfus; S J Fogarty
Journal:  J Virol       Date:  1989-04       Impact factor: 5.103

5.  Creation of a processed pseudogene by retroviral infection.

Authors:  M Linial
Journal:  Cell       Date:  1987-04-10       Impact factor: 41.582

6.  Mutation of an RSV intronic element abolishes both U11/U12 snRNP binding and negative regulation of splicing.

Authors:  R R Gontarek; M T McNally; K Beemon
Journal:  Genes Dev       Date:  1993-10       Impact factor: 11.361

7.  A suboptimal src 3' splice site is necessary for efficient replication of Rous sarcoma virus.

Authors:  L Zhang; C M Stoltzfus
Journal:  Virology       Date:  1995-02-01       Impact factor: 3.616

8.  Intronic sequences and 3' splice sites control Rous sarcoma virus RNA splicing.

Authors:  M T McNally; K Beemon
Journal:  J Virol       Date:  1992-01       Impact factor: 5.103

9.  Regulation of Rous sarcoma virus RNA splicing and stability.

Authors:  S Arrigo; K Beemon
Journal:  Mol Cell Biol       Date:  1988-11       Impact factor: 4.272

10.  Selection of alternative 5' splice sites: role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1.

Authors:  I C Eperon; O V Makarova; A Mayeda; S H Munroe; J F Cáceres; D G Hayward; A R Krainer
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

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  7 in total

1.  SRp30c is a repressor of 3' splice site utilization.

Authors:  Martin J Simard; Benoit Chabot
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

2.  Solution structure of the pseudo-5' splice site of a retroviral splicing suppressor.

Authors:  Javier Cabello-Villegas; Keith E Giles; Ana Maria Soto; Ping Yu; Annie Mougin; Karen L Beemon; Yun-Xing Wang
Journal:  RNA       Date:  2004-09       Impact factor: 4.942

3.  Retroviral splicing suppressor sequesters a 3' splice site in a 50S aberrant splicing complex.

Authors:  Keith E Giles; Karen L Beemon
Journal:  Mol Cell Biol       Date:  2005-06       Impact factor: 4.272

4.  The negative regulator of splicing element of Rous sarcoma virus promotes polyadenylation.

Authors:  Jeremy E Wilusz; Karen L Beemon
Journal:  J Virol       Date:  2006-10       Impact factor: 5.103

Review 5.  RNA processing control in avian retroviruses.

Authors:  Mark T McNally
Journal:  Front Biosci       Date:  2008-05-01

6.  Juxtaposition of two distant, serine-arginine-rich protein-binding elements is required for optimal polyadenylation in Rous sarcoma virus.

Authors:  Stephen W Hudson; Mark T McNally
Journal:  J Virol       Date:  2011-08-17       Impact factor: 5.103

Review 7.  The retrovirus RNA trafficking granule: from birth to maturity.

Authors:  Alan W Cochrane; Mark T McNally; Andrew J Mouland
Journal:  Retrovirology       Date:  2006-03-17       Impact factor: 4.602

  7 in total

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