Literature DB >> 11451953

Expression of a micro-protein.

X Yu1, J R Warner.   

Abstract

The smallest known open reading frame encodes the ribosomal protein L41, which in yeast is composed of only 24 amino acids, 17 of which are arginine or lysine. Because of the unique problems that might attend the translation of such a short open reading frame, we have investigated the properties and the translation of the mRNAs encoding L41. In Saccharomyces cerevisiae L41 is encoded by two linked genes, RPL41A and RPL41B. These genes give rise to mRNAs that have short 5' leaders of 18 and 22 nucleotides and rather long 3' leaders of 203 and 210 nucleotides not including their poly(A) tails. The mRNAs are translated exclusively on monosomes, suggesting that ribosomes do not remain attached to the mRNA after termination of translation. Calculations based on the abundance of ribosomes and of L41 mRNA indicate that the entire translation event, from initiation through termination, must occur in approximately 2 s. Termination of translation after only 25 codons does not subject the mRNAs encoding L41 to nonsense-mediated decay. Surprisingly, despite the L41 ribosomal protein being conserved from the archaea through the mammalia, S. cerevisiae can grow relatively normally after deletion of both RPL41A and RPL41B.

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Year:  2001        PMID: 11451953     DOI: 10.1074/jbc.M103772200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  23 in total

1.  Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae.

Authors:  Yoav Arava; Yulei Wang; John D Storey; Chih Long Liu; Patrick O Brown; Daniel Herschlag
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-26       Impact factor: 11.205

2.  Why Dom34 stimulates growth of cells with defects of 40S ribosomal subunit biosynthesis.

Authors:  Arpita Bhattacharya; Kerri B McIntosh; Ian M Willis; Jonathan R Warner
Journal:  Mol Cell Biol       Date:  2010-09-27       Impact factor: 4.272

3.  The decapping activator Lsm1p-7p-Pat1p complex has the intrinsic ability to distinguish between oligoadenylated and polyadenylated RNAs.

Authors:  Ashis Chowdhury; Jaba Mukhopadhyay; Sundaresan Tharun
Journal:  RNA       Date:  2007-05-18       Impact factor: 4.942

4.  A quantitative assay for measuring mRNA decapping by splinted ligation reverse transcription polymerase chain reaction: qSL-RT-PCR.

Authors:  Nathan Blewett; Jeff Coller; Aaron Goldstrohm
Journal:  RNA       Date:  2011-01-10       Impact factor: 4.942

5.  Ribosome deficiency protects against ER stress in Saccharomyces cerevisiae.

Authors:  Kristan K Steffen; Mark A McCormick; Kim M Pham; Vivian L MacKay; Joe R Delaney; Christopher J Murakami; Matt Kaeberlein; Brian K Kennedy
Journal:  Genetics       Date:  2012-02-29       Impact factor: 4.562

6.  The canonical UPF1-dependent nonsense-mediated mRNA decay is inhibited in transcripts carrying a short open reading frame independent of sequence context.

Authors:  Ana Luísa Silva; Francisco J C Pereira; Ana Morgado; Jian Kong; Rute Martins; Paula Faustino; Stephen A Liebhaber; Luísa Romão
Journal:  RNA       Date:  2006-10-31       Impact factor: 4.942

7.  Decreased peptidyltransferase activity correlates with increased programmed -1 ribosomal frameshifting and viral maintenance defects in the yeast Saccharomyces cerevisiae.

Authors:  Arturas Meskauskas; Jason W Harger; Kristi L Muldoon Jacobs; Jonathan D Dinman
Journal:  RNA       Date:  2003-08       Impact factor: 4.942

Review 8.  Ribosome biogenesis in the yeast Saccharomyces cerevisiae.

Authors:  John L Woolford; Susan J Baserga
Journal:  Genetics       Date:  2013-11       Impact factor: 4.562

9.  Human ribosomal protein L13a is dispensable for canonical ribosome function but indispensable for efficient rRNA methylation.

Authors:  Sujan Chaudhuri; Keyur Vyas; Purvi Kapasi; Anton A Komar; Jonathan D Dinman; Sailen Barik; Barsanjit Mazumder
Journal:  RNA       Date:  2007-10-05       Impact factor: 4.942

10.  rRNA maturation in yeast cells depleted of large ribosomal subunit proteins.

Authors:  Gisela Pöll; Tobias Braun; Jelena Jakovljevic; Andreas Neueder; Steffen Jakob; John L Woolford; Herbert Tschochner; Philipp Milkereit
Journal:  PLoS One       Date:  2009-12-11       Impact factor: 3.240

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