Literature DB >> 11427534

A unique beta-hairpin protruding from AAA+ ATPase domain of RuvB motor protein is involved in the interaction with RuvA DNA recognition protein for branch migration of Holliday junctions.

Y W Han1, H Iwasaki, T Miyata, K Mayanagi, K Yamada, K Morikawa, H Shinagawa.   

Abstract

The Escherichia coli RuvB protein is a motor protein that forms a complex with RuvA and promotes branch migration of Holliday junctions during homologous recombination. This study describes the characteristics of two RuvB mutants, I148T and I150T, that do not promote branch migration in the presence of RuvA. These RuvB mutants hydrolyzed ATP and bound duplex DNA with the same efficiency as wild-type RuvB, but the mutants did not form a complex with RuvA and were defective in loading onto junction DNA in a RuvA-assisted manner. A recent crystallographic study revealed that Ile(148) and Ile(150) are in a unique beta-hairpin that protrudes from the AAA(+) ATPase domain of RuvB. We propose that this beta-hairpin interacts with hydrophobic residues in the mobile third domain of RuvA and that this interaction is vital for the RuvA-assisted loading of RuvB onto Holliday junction DNA.

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Year:  2001        PMID: 11427534     DOI: 10.1074/jbc.M103611200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  19 in total

1.  The ATP hydrolyzing transcription activator phage shock protein F of Escherichia coli: identifying a surface that binds sigma 54.

Authors:  Patricia Bordes; Siva R Wigneshweraraj; Jörg Schumacher; Xiaodong Zhang; Matthew Chaney; Martin Buck
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-24       Impact factor: 11.205

2.  Nucleotide-dependent interactions between a fork junction-RNA polymerase complex and an AAA+ transcriptional activator protein.

Authors:  W V Cannon; J Schumacher; M Buck
Journal:  Nucleic Acids Res       Date:  2004-08-27       Impact factor: 16.971

3.  Structure of RavA MoxR AAA+ protein reveals the design principles of a molecular cage modulating the inducible lysine decarboxylase activity.

Authors:  Majida El Bakkouri; Irina Gutsche; Usheer Kanjee; Boyu Zhao; Miao Yu; Gael Goret; Guy Schoehn; Wim P Burmeister; Walid A Houry
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-09       Impact factor: 11.205

4.  Direct observation of DNA rotation during branch migration of Holliday junction DNA by Escherichia coli RuvA-RuvB protein complex.

Authors:  Yong-Woon Han; Tomomi Tani; Masahito Hayashi; Takashi Hishida; Hiroshi Iwasaki; Hideo Shinagawa; Yoshie Harada
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-24       Impact factor: 11.205

5.  A structural model reveals energy transduction in dynein.

Authors:  Adrian W R Serohijos; Yiwen Chen; Feng Ding; Timothy C Elston; Nikolay V Dokholyan
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-22       Impact factor: 11.205

6.  Functional characterization of the RuvB homologs from Mycoplasma pneumoniae and Mycoplasma genitalium.

Authors:  Silvia Estevão; Marcel Sluijter; Nico G Hartwig; Annemarie M C van Rossum; Cornelis Vink
Journal:  J Bacteriol       Date:  2011-09-23       Impact factor: 3.490

7.  Receiver domains control the active-state stoichiometry of Aquifex aeolicus sigma54 activator NtrC4, as revealed by electrospray ionization mass spectrometry.

Authors:  Joseph D Batchelor; Harry J Sterling; Eunmi Hong; Evan R Williams; David E Wemmer
Journal:  J Mol Biol       Date:  2009-08-21       Impact factor: 5.469

8.  DNA Helicases.

Authors:  Piero R Bianco
Journal:  EcoSal Plus       Date:  2010-09

9.  Direct evidence that a conserved arginine in RuvB AAA+ ATPase acts as an allosteric effector for the ATPase activity of the adjacent subunit in a hexamer.

Authors:  Takashi Hishida; Yong-Woon Han; Satoko Fujimoto; Hiroshi Iwasaki; Hideo Shinagawa
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-21       Impact factor: 11.205

10.  Regulation of the transcriptional activator NtrC1: structural studies of the regulatory and AAA+ ATPase domains.

Authors:  Seok-Yong Lee; Armando De La Torre; Dalai Yan; Sydney Kustu; B Tracy Nixon; David E Wemmer
Journal:  Genes Dev       Date:  2003-10-15       Impact factor: 11.361

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