Literature DB >> 11420444

Kinetic properties and inhibition of the dimeric dUTPase-dUDPase from Leishmania major.

F Hidalgo-Zarco1, A G Camacho, V Bernier-Villamor, J Nord, L M Ruiz-Pérez, D González-Pacanowska.   

Abstract

Kinetic properties of the dimeric enzyme dUTPase from Leishmania major were studied using a continuous spectrophotometric method. dUTP was the natural substrate and dUMP and PPi the products of the hydrolysis. The trypanosomatid enzyme exhibited a low K(m) value for dUTP (2.11 microM), a k(cat) of 49 s(-1), strict Michaelis-Menten kinetics and is a potent catalyst of dUDP hydrolysis, whereas in other dUTPases described, this compound acts as a competitive inhibitor. Discrimination is achieved for the base and sugar moiety showing specificity constants for different dNTPs similar to those of bacterial, viral, and human enzymes. In the alkaline range, the K(m) for dUTP increases with the dissociation of ionizable groups showing pK(a) values of 8.8, identified as the uracil moiety of dUTP and 10, whereas in the acidic range, K(m) is regulated by an enzyme residue exhibiting a pK(a) of 7.1. Activity is strongly inhibited by the nucleoside triphosphate analog alpha-beta-imido-dUTP, indicating that the enzyme can bind triphosphate analogs. The existence of specific inhibition and the apparent structural and kinetic differences (reflected in different binding strength of dNTPs) with other eukaryotic dUTPases suggest that the present enzyme might be exploited as a target for new drugs against leishmaniasis.

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Year:  2001        PMID: 11420444      PMCID: PMC2374113          DOI: 10.1110/ps.48801

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  26 in total

1.  A continuous spectrophotometric assay for argininosuccinate synthetase based on pyrophosphate formation.

Authors:  W E O'Brien
Journal:  Anal Biochem       Date:  1976-12       Impact factor: 3.365

2.  Properties of Leishmania major dUTP nucleotidohydrolase, a distinct nucleotide-hydrolysing enzyme in kinetoplastids.

Authors:  A Camacho; F Hidalgo-Zarco; V Bernier-Villamor; L M Ruiz-Pérez; D González-Pacanowska
Journal:  Biochem J       Date:  2000-02-15       Impact factor: 3.857

3.  Pseudouridine synthases: four families of enzymes containing a putative uridine-binding motif also conserved in dUTPases and dCTP deaminases.

Authors:  E V Koonin
Journal:  Nucleic Acids Res       Date:  1996-06-15       Impact factor: 16.971

4.  Lethality of a dut (deoxyuridine triphosphatase) mutation in Escherichia coli.

Authors:  H H el-Hajj; H Zhang; B Weiss
Journal:  J Bacteriol       Date:  1988-03       Impact factor: 3.490

5.  Crystal structure of dUTP pyrophosphatase from feline immunodeficiency virus.

Authors:  G S Prasad; E A Stura; D E McRee; G S Laco; C Hasselkus-Light; J H Elder; C D Stout
Journal:  Protein Sci       Date:  1996-12       Impact factor: 6.725

6.  Human dUTP pyrophosphatase: uracil recognition by a beta hairpin and active sites formed by three separate subunits.

Authors:  C D Mol; J M Harris; E M McIntosh; J A Tainer
Journal:  Structure       Date:  1996-09-15       Impact factor: 5.006

7.  Transient accumulation of Okazaki fragments as a result of uracil incorporation into nascent DNA.

Authors:  B K Tye; P O Nyman; I R Lehman; S Hochhauser; B Weiss
Journal:  Proc Natl Acad Sci U S A       Date:  1977-01       Impact factor: 11.205

8.  Bacillus subtilis deoxyuridinetriphosphatase and its bacteriophage PBS2-induced inhibitor.

Authors:  A R Price; J Frato
Journal:  J Biol Chem       Date:  1975-11-25       Impact factor: 5.157

9.  Kinetic characterization of dUTPase from Escherichia coli.

Authors:  G Larsson; P O Nyman; J O Kvassman
Journal:  J Biol Chem       Date:  1996-09-27       Impact factor: 5.157

10.  Synthesis of 2'-deoxyuridine 5'-(alpha,beta-imido) triphosphate: a substrate analogue and potent inhibitor of dUTPase.

Authors:  T Persson; G Larsson; P O Nyman
Journal:  Bioorg Med Chem       Date:  1996-04       Impact factor: 3.641

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  5 in total

1.  Nucleotide pyrophosphatase employs a P-loop-like motif to enhance catalytic power and NDP/NTP discrimination.

Authors:  Ildikó Pécsi; Judit E Szabó; Scott D Adams; István Simon; James R Sellers; Beáta G Vértessy; Judit Tóth
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-10       Impact factor: 11.205

Review 2.  Pyrimidine metabolism in schistosomes: A comparison with other parasites and the search for potential chemotherapeutic targets.

Authors:  Mahmoud H El Kouni
Journal:  Comp Biochem Physiol B Biochem Mol Biol       Date:  2017-07-21       Impact factor: 2.231

3.  The crystal structure of the Leishmania major deoxyuridine triphosphate nucleotidohydrolase in complex with nucleotide analogues, dUMP, and deoxyuridine.

Authors:  Glyn R Hemsworth; Olga V Moroz; Mark J Fogg; Benjamin Scott; Cristina Bosch-Navarrete; Dolores González-Pacanowska; Keith S Wilson
Journal:  J Biol Chem       Date:  2011-03-15       Impact factor: 5.157

Review 4.  Fresh insights into the pyrimidine metabolism in the trypanosomatids.

Authors:  Kartikeya Tiwari; Vikash Kumar Dubey
Journal:  Parasit Vectors       Date:  2018-02-08       Impact factor: 3.876

5.  Investigation of acyclic uridine amide and 5'-amido nucleoside analogues as potential inhibitors of the Plasmodium falciparum dUTPase.

Authors:  Shahienaz E Hampton; Alessandro Schipani; Cristina Bosch-Navarrete; Eliseo Recio; Marcel Kaiser; Pia Kahnberg; Dolores González-Pacanowska; Nils Gunnar Johansson; Ian H Gilbert
Journal:  Bioorg Med Chem       Date:  2013-07-12       Impact factor: 3.641

  5 in total

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