Literature DB >> 11415144

Two-state protein model with water interactions: influence of temperature on the intrinsic viscosity of myoglobin.

A Bakk1.   

Abstract

We describe a single-domain protein as a two-state system with water interactions. Around the unfolded apolar parts of the protein we incorporate the hydration effect by introducing hydrogen bonds between the water molecules in order to mimic the "icelike" shell structure. Intrinsic viscosity, proportional to the effective hydrodynamic volume, for sperm whale metmyoglobin is assigned from experimental data in the folded and in the denaturated state. By weighing statistically the two states against the degree of folding, we express the total intrinsic viscosity. The temperature dependence of the intrinsic viscosity, for different chemical potentials, is in good correspondence with experimental data [P. L. Privalov et al., J. Mol. Biol. 190, 487 (1986)]. Cold and warm unfolding, common to small globular proteins, is also a result of the model.

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Year:  2001        PMID: 11415144     DOI: 10.1103/PhysRevE.63.061906

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  1 in total

1.  Apolar and polar solvation thermodynamics related to the protein unfolding process.

Authors:  Audun Bakk; Johan S Høye; Alex Hansen
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

  1 in total

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