Literature DB >> 11412053

Methodologic pitfalls in the determination of genetic anticipation: the case of Crohn disease.

M F Picco1, S Goodman, J Reed, T M Bayless.   

Abstract

BACKGROUND: The term genetic anticipation is used when genetically transmitted disease manifests at increasingly younger ages with each succeeding generation: that is, if the offspring of patients develop the disease, they will tend to do so at an earlier age than their parents. In some monogenetic disorders, genetic anticipation has a biological basis in expanded genetic triplet repeats; however, some have claimed that it occurs in polygenic disorders, such as Crohn disease, in which its mechanism cannot be explained.
OBJECTIVE: To show how apparent changes in age at diagnosis of Crohn disease between generations, which could suggest genetic anticipation, can be an artifact of inadequate analysis based on age at diagnosis in cohorts that have not been followed for a sufficiently long time.
DESIGN: Comparison of ages at diagnosis of Crohn disease among different birth cohorts, before and after adjustment for observation time.
SETTING: Meyerhoff Center for Inflammatory Bowel Disease, Johns Hopkins Hospital, Baltimore, Maryland. PATIENTS: 928 consecutive outpatients with Crohn disease. MEASUREMENTS: Trends in age at diagnosis of Crohn disease among birth cohorts were determined by calculating Pearson correlation coefficients and performing Kaplan-Meyer analysis before and after adjustment for observation time. Adjustment for observation time was performed by ensuring that the time during which all included patients were at risk for Crohn disease was equal and that all patients had developed disease by the end of the risk period.
RESULTS: Mean age at diagnosis decreased by approximately 5 years with each subsequent 10-year birth cohort on the basis of crude cross-sectional data that could suggest genetic anticipation between generations. However, after adjustment for observation time, the age at diagnosis decreased minimally, if at all, with each successive generation.
CONCLUSIONS: Apparent genetic anticipation can be explained by observational biases without invoking any additional genetic influences. Claims for genetic anticipation must be based on methods that properly account for the duration of observation in all persons being studied.

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Year:  2001        PMID: 11412053     DOI: 10.7326/0003-4819-134-12-200106190-00013

Source DB:  PubMed          Journal:  Ann Intern Med        ISSN: 0003-4819            Impact factor:   25.391


  15 in total

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Review 2.  Molecular genetics of schizophrenia: a critical review.

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Review 4.  A review of statistical methods for testing genetic anticipation: looking for an answer in Lynch syndrome.

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Journal:  Genet Epidemiol       Date:  2010-11       Impact factor: 2.135

5.  Age at cancer diagnosis for blacks compared with whites in the United States.

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6.  Fertility and apparent genetic anticipation in Lynch syndrome.

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7.  Anticipation in familial pancreatic cancer.

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8.  Age at intracranial aneurysm rupture among generations: Familial Intracranial Aneurysm Study.

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9.  No evidence of genetic anticipation in a large family with Lynch syndrome.

Authors:  D Stupart; P Goldberg; U Algar; A Vorster; R Ramesar
Journal:  Fam Cancer       Date:  2014-03       Impact factor: 2.375

10.  Longitudinal analysis casts doubt on the presence of genetic anticipation in heritable pulmonary arterial hypertension.

Authors:  Emma K Larkin; John H Newman; Eric D Austin; Anna R Hemnes; Lisa Wheeler; Ivan M Robbins; James D West; John A Phillips; Rizwan Hamid; James E Loyd
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