Literature DB >> 11410288

Use of silicate sol-gels to trap the R and T quaternary conformational states of pig kidney fructose-1,6-bisphosphatase.

J K McIninch1, E R Kantrowitz.   

Abstract

Encapsulation of the homotetrameric pig kidney fructose-1,6-bisphosphatase (FBPase) in tetramethyl orthosilicate sol-gels was used to dramatically reduce the rate of the allosteric transition of the enzyme between the T and R allosteric states. When assayed in the absence of the allosteric inhibitor AMP, the enzyme encapsulated in the T-state exhibited little activity. The enzyme encapsulated in the R-state exhibited a 4-fold lower k(cat) and V(max) than the enzyme in solution, and the apparent K(m) for this enzyme was 350-fold higher than the corresponding value for the enzyme in solution. The [Mg(2+)](0.5) for the encapsulated enzyme was only 0.1 mM, compared to 0.54 mM for the normal enzyme. Magnesium activation, under both sets of conditions, was cooperative with a Hill coefficient of approximately 2. The activity of enzyme encapsulated in the R-state decreased to about 70% of initial activity within 1 min of adding AMP, it then decreased slowly to about 40% of initial activity over the following 7 h. Under the conditions tested, the encapsulated enzyme never became completely inactivated and AMP inhibition was no longer cooperative. For enzyme encapsulated in the T-state, activity was restored over approximately 7 h after removal of the AMP. The biphasic and slow responses to changing AMP levels suggest that encapsulated enzyme can be used to study the effects of local conformational changes distinct from the global quaternary conformational changes by slowing down the ability of the enzyme to carry out global rotations. The response to AMP exhibited by the encapsulated enzyme is consistent with the ability of AMP, at least partially, to directly influence the activity of the active site within each subunit.

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Year:  2001        PMID: 11410288     DOI: 10.1016/s0167-4838(01)00203-5

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  5 in total

1.  Unfolding of Green Fluorescent Protein mut2 in wet nanoporous silica gels.

Authors:  Barbara Campanini; Sara Bologna; Fabio Cannone; Giuseppe Chirico; Andrea Mozzarelli; Stefano Bettati
Journal:  Protein Sci       Date:  2005-03-31       Impact factor: 6.725

2.  Tracking unfolding and refolding of single GFPmut2 molecules.

Authors:  Fabio Cannone; Sara Bologna; Barbara Campanini; Alberto Diaspro; Stefano Bettati; Andrea Mozzarelli; Giuseppe Chirico
Journal:  Biophys J       Date:  2005-07-01       Impact factor: 4.033

3.  Dynamics of proteins encapsulated in silica sol-gel glasses studied with IR vibrational echo spectroscopy.

Authors:  Aaron M Massari; Ilya J Finkelstein; Michael D Fayer
Journal:  J Am Chem Soc       Date:  2006-03-29       Impact factor: 15.419

4.  Tyrosine phenol-lyase and tryptophan indole-lyase encapsulated in wet nanoporous silica gels: Selective stabilization of tertiary conformations.

Authors:  Barbara Pioselli; Stefano Bettati; Tatyana V Demidkina; Lyudmila N Zakomirdina; Robert S Phillips; Andrea Mozzarelli
Journal:  Protein Sci       Date:  2004-04       Impact factor: 6.725

5.  The tertiary origin of the allosteric activation of E. coli glucosamine-6-phosphate deaminase studied by sol-gel nanoencapsulation of its T conformer.

Authors:  Sergio Zonszein; Laura I Álvarez-Añorve; Roberto J Vázquez-Núñez; Mario L Calcagno
Journal:  PLoS One       Date:  2014-05-02       Impact factor: 3.240

  5 in total

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