Literature DB >> 11410036

Novel shape descriptors for molecular graphs.

M Randić1.   

Abstract

We report on novel graph theoretical indices which are sensitive to the shapes of molecular graphs. In contrast to the Kier's kappa shape indices which were based on a comparison of a molecular graph with graphs representing the extreme shapes, the linear graph and the "star" graph, the new shape indices are obtained by considering for all atoms the number of paths and the number of walks within a graph and then making the quotients of the number of paths and the number of walks the same length. The new shape indices show much higher discrimination among isomers when compared to the kappa shape indices. We report the new shape indices for smaller alkanes and several cyclic structures and illustrate their use in structure-property correlations. The new indices offer regressions of high quality for diverse physicochemical properties of octanes. They also have lead to a novel classification of physicochemical properties of alkanes.

Entities:  

Year:  2001        PMID: 11410036     DOI: 10.1021/ci0001031

Source DB:  PubMed          Journal:  J Chem Inf Comput Sci        ISSN: 0095-2338


  7 in total

1.  Bioavailability prediction based on molecular structure for a diverse series of drugs.

Authors:  Joseph V Turner; Desmond J Maddalena; Snezana Agatonovic-Kustrin
Journal:  Pharm Res       Date:  2004-01       Impact factor: 4.200

2.  On an aspect of calculated molecular descriptors in QSAR studies of quinolone antibacterials.

Authors:  Payel Ghosh; Megha Thanadath; Manish C Bagchi
Journal:  Mol Divers       Date:  2006-08-02       Impact factor: 2.943

3.  Stereoselective virtual screening of the ZINC database using atom pair 3D-fingerprints.

Authors:  Mahendra Awale; Xian Jin; Jean-Louis Reymond
Journal:  J Cheminform       Date:  2015-02-10       Impact factor: 5.514

4.  Support vector machine classification of streptavidin-binding aptamers.

Authors:  Xinliang Yu; Yixiong Yu; Qun Zeng
Journal:  PLoS One       Date:  2014-06-13       Impact factor: 3.240

Review 5.  Towards reproducible computational drug discovery.

Authors:  Nalini Schaduangrat; Samuel Lampa; Saw Simeon; Matthew Paul Gleeson; Ola Spjuth; Chanin Nantasenamat
Journal:  J Cheminform       Date:  2020-01-28       Impact factor: 5.514

Review 6.  Application of TD-DFT Theory to Studying Porphyrinoid-Based Photosensitizers for Photodynamic Therapy: A Review.

Authors:  Agnieszka Drzewiecka-Matuszek; Dorota Rutkowska-Zbik
Journal:  Molecules       Date:  2021-11-26       Impact factor: 4.411

7.  High-Throughput Identification of Mammalian Secreted Proteins Using Species-Specific Scheme and Application to Human Proteome.

Authors:  Jian Zhang; Haiting Chai; Song Guo; Huaping Guo; Yanling Li
Journal:  Molecules       Date:  2018-06-14       Impact factor: 4.411

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.