Literature DB >> 11406376

Single-molecule fluorescence methods for the study of nucleic acids.

T Ha1.   

Abstract

Single-molecule fluorescence methods and biomechanical tools provide exciting new opportunities to probe biochemical processes in unprecedented detail. The detection and spectroscopy of single fluorophores have recently been used to observe conformational changes and biochemical events involving nucleic acids. A number of fluorescence observables, including localization, quenching, polarization response and fluorescence resonance energy transfer, have been utilized. An exciting new opportunity of combining fluorescence methods and biomechanical tools to study the structural changes and functions of enzymes that participate in nucleic acid metabolism has also arisen.

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Year:  2001        PMID: 11406376     DOI: 10.1016/s0959-440x(00)00204-9

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  35 in total

1.  Scanning confocal fluorescence microscopy for single molecule analysis of nucleotide excision repair complexes.

Authors:  G M J Segers-Nolten; C Wyman; N Wijgers; W Vermeulen; A T M Lenferink; J H J Hoeijmakers; J Greve; C Otto
Journal:  Nucleic Acids Res       Date:  2002-11-01       Impact factor: 16.971

2.  Studies on the structure and dynamics of the human telomeric G quadruplex by single-molecule fluorescence resonance energy transfer.

Authors:  Liming Ying; Jeremy J Green; Haitao Li; David Klenerman; Shankar Balasubramanian
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-25       Impact factor: 11.205

3.  Single-molecule imaging of cooperative assembly of gamma-hemolysin on erythrocyte membranes.

Authors:  Vananh T Nguyen; Yoshiyuki Kamio; Hideo Higuchi
Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

4.  Freely diffusing single hairpin ribozymes provide insights into the role of secondary structure and partially folded states in RNA folding.

Authors:  Goran Pljevaljcić; David P Millar; Ashok A Deniz
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

5.  Comparative analysis of RNA/protein dynamics for the arginine-rich-binding motif and zinc-finger-binding motif proteins encoded by HIV-1.

Authors:  Hui Wang; Xiaojing Ma; Yu-Shan Yeh; Yongjin Zhu; Matthew D Daugherty; Alan D Frankel; Karin Musier-Forsyth; Paul F Barbara
Journal:  Biophys J       Date:  2010-11-17       Impact factor: 4.033

6.  Single-molecule spectroscopic study of dynamic nanoscale DNA bending behavior of HIV-1 nucleocapsid protein.

Authors:  Hui Wang; Karin Musier-Forsyth; Caroline Falk; Paul F Barbara
Journal:  J Phys Chem B       Date:  2012-05-16       Impact factor: 2.991

7.  A flexible approach to the calculation of resonance energy transfer efficiency between multiple donors and acceptors in complex geometries.

Authors:  Ben Corry; Dylan Jayatilaka; Paul Rigby
Journal:  Biophys J       Date:  2005-09-30       Impact factor: 4.033

8.  Single-molecule FRET studies of important intermediates in the nucleocapsid-protein-chaperoned minus-strand transfer step in HIV-1 reverse transcription.

Authors:  Hsiao-Wei Liu; Gonzalo Cosa; Christy F Landes; Yining Zeng; Brandie J Kovaleski; Daniel G Mullen; George Barany; Karin Musier-Forsyth; Paul F Barbara
Journal:  Biophys J       Date:  2005-08-12       Impact factor: 4.033

9.  Information theoretical approach to single-molecule experimental design and interpretation.

Authors:  David S Talaga
Journal:  J Phys Chem A       Date:  2006-08-10       Impact factor: 2.781

10.  Paxillin dynamics measured during adhesion assembly and disassembly by correlation spectroscopy.

Authors:  Michelle A Digman; Claire M Brown; Alan R Horwitz; William W Mantulin; Enrico Gratton
Journal:  Biophys J       Date:  2007-11-09       Impact factor: 4.033

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