Literature DB >> 11395498

The disordered mobile loop of GroES folds into a defined beta-hairpin upon binding GroEL.

F Shewmaker1, K Maskos, C Simmerling, S J Landry.   

Abstract

The GroES mobile loop is a stretch of approximately 16 amino acids that exhibits a high degree of flexible disorder in the free protein. This loop is responsible for the interaction between GroES and GroEL, and it undergoes a folding transition upon binding to GroEL. Results derived from a combination of transferred nuclear Overhauser effect NMR experiments and molecular dynamics simulations indicate that the mobile loop adopts a beta-hairpin structure with a Type I, G1 Bulge turn. This structure is distinct from the conformation of the loop in the co-crystal of GroES with GroEL-ADP but identical to the conformation of the bacteriophage-panned "strongly binding peptide" in the co-crystal with GroEL. Analysis of sequence conservation suggests that sequences of the mobile loop and strongly binding peptide were selected for the ability to adopt this hairpin conformation.

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Year:  2001        PMID: 11395498     DOI: 10.1074/jbc.M102765200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  11 in total

1.  A mobile loop order-disorder transition modulates the speed of chaperonin cycling.

Authors:  Frank Shewmaker; Michael J Kerner; Manajit Hayer-Hartl; Gracjana Klein; Costa Georgopoulos; Samuel J Landry
Journal:  Protein Sci       Date:  2004-07-06       Impact factor: 6.725

2.  Topographic studies of the GroEL-GroES chaperonin complex by chemical cross-linking using diformyl ethynylbenzene: the power of high resolution electron transfer dissociation for determination of both peptide sequences and their attachment sites.

Authors:  Michael J Trnka; A L Burlingame
Journal:  Mol Cell Proteomics       Date:  2010-09-02       Impact factor: 5.911

3.  Direct NMR observation of a substrate protein bound to the chaperonin GroEL.

Authors:  Reto Horst; Eric B Bertelsen; Jocelyne Fiaux; Gerhard Wider; Arthur L Horwich; Kurt Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-22       Impact factor: 11.205

4.  Proton-proton Overhauser NMR spectroscopy with polypeptide chains in large structures.

Authors:  Reto Horst; Gerhard Wider; Jocelyne Fiaux; Eric B Bertelsen; Arthur L Horwich; Kurt Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-10       Impact factor: 11.205

5.  Analysis of peptides and proteins in their binding to GroEL.

Authors:  Yali Li; Zhida Zheng; Andrew Ramsey; Lingling Chen
Journal:  J Pept Sci       Date:  2010-12       Impact factor: 1.905

6.  Covalent structural changes in unfolded GroES that lead to amyloid fibril formation detected by NMR: insight into intrinsically disordered proteins.

Authors:  Hisanori Iwasa; Shunsuke Meshitsuka; Kunihiro Hongo; Tomohiro Mizobata; Yasushi Kawata
Journal:  J Biol Chem       Date:  2011-04-20       Impact factor: 5.157

7.  Identifying natural substrates for chaperonins using a sequence-based approach.

Authors:  George Stan; Bernard R Brooks; George H Lorimer; D Thirumalai
Journal:  Protein Sci       Date:  2004-12-02       Impact factor: 6.725

8.  Protein disorder is positively correlated with gene expression in Escherichia coli.

Authors:  Oleg Paliy; Shawn M Gargac; Yugong Cheng; Vladimir N Uversky; A Keith Dunker
Journal:  J Proteome Res       Date:  2008-05-09       Impact factor: 4.466

9.  An ORFan no more: the bacteriophage T4 39.2 gene product, NwgI, modulates GroEL chaperone function.

Authors:  Debbie Ang; Costa Georgopoulos
Journal:  Genetics       Date:  2012-01-10       Impact factor: 4.562

10.  Markov propagation of allosteric effects in biomolecular systems: application to GroEL-GroES.

Authors:  Chakra Chennubhotla; Ivet Bahar
Journal:  Mol Syst Biol       Date:  2006-07-04       Impact factor: 11.429

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