Literature DB >> 11395434

Compositional symmetries in complete genomes.

D Qi1, A J Cuticchia.   

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Year:  2001        PMID: 11395434     DOI: 10.1093/bioinformatics/17.6.557

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


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  11 in total

1.  Revisiting the Relationships Between Genomic G + C Content, RNA Secondary Structures, and Optimal Growth Temperature.

Authors:  Michelle M Meyer
Journal:  J Mol Evol       Date:  2020-11-20       Impact factor: 2.395

2.  Stem-loop structures in prokaryotic genomes.

Authors:  Mauro Petrillo; Giustina Silvestro; Pier Paolo Di Nocera; Angelo Boccia; Giovanni Paolella
Journal:  BMC Genomics       Date:  2006-07-04       Impact factor: 3.969

3.  High order intra-strand partial symmetry increases with organismal complexity in animal evolution.

Authors:  Shengqin Wang; Jing Tu; Zhongwei Jia; Zuhong Lu
Journal:  Sci Rep       Date:  2014-09-29       Impact factor: 4.379

4.  Inversion symmetry of DNA k-mer counts: validity and deviations.

Authors:  Sagi Shporer; Benny Chor; Saharon Rosset; David Horn
Journal:  BMC Genomics       Date:  2016-08-31       Impact factor: 3.969

5.  A study in entire chromosomes of violations of the intra-strand parity of complementary nucleotides (Chargaff's second parity rule).

Authors:  B R Powdel; Siddhartha Sankar Satapathy; Aditya Kumar; Pankaj Kumar Jha; Alak Kumar Buragohain; Munindra Borah; Suvendra Kumar Ray
Journal:  DNA Res       Date:  2009-10-27       Impact factor: 4.458

6.  Inverse symmetry in complete genomes and whole-genome inverse duplication.

Authors:  Sing-Guan Kong; Wen-Lang Fan; Hong-Da Chen; Zi-Ting Hsu; Nengji Zhou; Bo Zheng; Hoong-Chien Lee
Journal:  PLoS One       Date:  2009-11-09       Impact factor: 3.240

7.  Evolutionary implications of inversions that have caused intra-strand parity in DNA.

Authors:  Kohji Okamura; John Wei; Stephen W Scherer
Journal:  BMC Genomics       Date:  2007-06-11       Impact factor: 3.969

8.  Conservation vs. variation of dinucleotide frequencies across bacterial and archaeal genomes: evolutionary implications.

Authors:  Hang Zhang; Peng Li; Hong-Sheng Zhong; Shang-Hong Zhang
Journal:  Front Microbiol       Date:  2013-09-06       Impact factor: 5.640

9.  The exceptional genomic word symmetry along DNA sequences.

Authors:  Vera Afreixo; João M O S Rodrigues; Carlos A C Bastos; Raquel M Silva
Journal:  BMC Bioinformatics       Date:  2016-02-03       Impact factor: 3.169

10.  Comparative genomic study reveals a transition from TA richness in invertebrates to GC richness in vertebrates at CpG flanking sites: an indication for context-dependent mutagenicity of methylated CpG sites.

Authors:  Yong Wang; Frederick C C Leung
Journal:  Genomics Proteomics Bioinformatics       Date:  2008-12       Impact factor: 7.691

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