Literature DB >> 11378480

Microbial genomes: dealing with diversity.

Y Boucher1, C L Nesbø, W F Doolittle.   

Abstract

We have now complete genome sequences of several pairs of closely related prokaryotes (conspecific strains or congeneric species). Surprisingly, even strains of the same species can differ by as much as 20% in gene content. Conceptual and methodological approaches for dealing with such diversity are now being developed, and should transform microbial genomics.

Mesh：

Year:  2001        PMID： 11378480     DOI： 10.1016/s1369-5274(00)00204-6

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN： 1369-5274            Impact factor:   7.934


  24 in total

1.  Evolution of photosynthetic prokaryotes: a maximum-likelihood mapping approach.

Authors:  Jason Raymond; Olga Zhaxybayeva; J Peter Gogarten; Robert E Blankenship
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-01-29       Impact factor: 6.237

2.  The ORFanage: an ORFan database.

Authors:  Naomi Siew; Yaniv Azaria; Daniel Fischer
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

Review 3.  Haemophilus influenzae: genetic variability and natural selection to identify virulence factors.

Authors:  Janet R Gilsdorf; Carl F Marrs; Betsy Foxman
Journal:  Infect Immun       Date:  2004-05       Impact factor: 3.441

4.  Extensive repetitive DNA facilitates prokaryotic genome plasticity.

Authors:  Rahul A Aras; Josephine Kang; Ariane I Tschumi; Yasuaki Harasaki; Martin J Blaser
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-30       Impact factor: 11.205

5.  Integrons in Xanthomonas: a source of species genome diversity.

Authors:  Michael R Gillings; Marita P Holley; H W Stokes; Andrew J Holmes
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-08       Impact factor: 11.205

6.  Recombination activity of a distinctive integron-gene cassette system associated with Pseudomonas stutzeri populations in soil.

Authors:  Andrew J Holmes; Marita P Holley; Andrew Mahon; Blair Nield; Michael Gillings; H W Stokes
Journal:  J Bacteriol       Date:  2003-02       Impact factor: 3.490

7.  Prevalence of the hifBC, hmw1A, hmw2A, hmwC, and hia Genes in Haemophilus influenzae Isolates.

Authors:  I Zafer Ecevit; Kirk W McCrea; Melinda M Pettigrew; Ananda Sen; Carl F Marrs; Janet R Gilsdorf
Journal:  J Clin Microbiol       Date:  2004-07       Impact factor: 5.948

8.  Bordetella species are distinguished by patterns of substantial gene loss and host adaptation.

Authors:  C A Cummings; M M Brinig; P W Lepp; S van de Pas; D A Relman
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

9.  Suppressive subtractive hybridization detects extensive genomic diversity in Thermotoga maritima.

Authors:  Camilla L Nesbø; Karen E Nelson; W Ford Doolittle
Journal:  J Bacteriol       Date:  2002-08       Impact factor: 3.490

10.  Extensive genomic diversity of closely related Wolbachia strains.

Authors:  Nadeeza Ishmael; Julie C Dunning Hotopp; Panagiotis Ioannidis; Sarah Biber; Joyce Sakamoto; Stefanos Siozios; Vishvanath Nene; John Werren; Kostas Bourtzis; Seth R Bordenstein; Hervé Tettelin
Journal:  Microbiology (Reading)       Date:  2009-04-23       Impact factor: 2.777
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