Literature DB >> 11377872

Description and application of a rapid method for genomic DNA direct sequencing.

E Krin1, F Hommais, O Soutourina, S Ngo, A Danchin, P Bertin.   

Abstract

We describe a rapid method for determining nucleotide sequences directly from total genomic DNA. This technique was used to determine genomic DNA sequences in various prokaryotic and eukaryotic microorganisms with a G+C content between 40 and 50%, e.g. Escherichia coli, Vibrio cholerae, Bacillus subtilis and Saccharomyces cerevisiae. Furthermore, the method was applied to accurately sequence up to 300 DNA base pairs in Photorhabdus luminescens, whose genome sequencing is currently under way. Taken together, these results provide evidence that our technique can be widely used to easily and efficiently determine genomic DNA sequences.

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Year:  2001        PMID: 11377872     DOI: 10.1111/j.1574-6968.2001.tb10679.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  3 in total

1.  The thiol-disulfide oxidoreductase system in the cold-adapted bacterium Pseudoalteromonas haloplanktis TAC 125: discovery of a novel disulfide oxidoreductase enzyme.

Authors:  Stefania Madonna; Rosanna Papa; Leila Birolo; Flavia Autore; Nunzianna Doti; Gennaro Marino; Eric Quemeneur; Giovanni Sannia; Maria L Tutino; Angela Duilio
Journal:  Extremophiles       Date:  2005-09-23       Impact factor: 2.395

2.  Control of bacterial motility by environmental factors in polarly flagellated and peritrichous bacteria isolated from Lake Baikal.

Authors:  O A Soutourina; E A Semenova; V V Parfenova; A Danchin; P Bertin
Journal:  Appl Environ Microbiol       Date:  2001-09       Impact factor: 4.792

3.  Characterization of bacterial operons consisting of two tubulins and a kinesin-like gene by the novel Two-Step Gene Walking method.

Authors:  Martin Pilhofer; Andreas Peter Bauer; Martina Schrallhammer; Lothar Richter; Wolfgang Ludwig; Karl-Heinz Schleifer; Giulio Petroni
Journal:  Nucleic Acids Res       Date:  2007-10-16       Impact factor: 16.971

  3 in total

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