Literature DB >> 11377780

Paramecium genome survey: a pilot project.

P Dessen1, M Zagulski, R Gromadka, H Plattner, R Kissmehl, E Meyer, M Bétermier, J E Schultz, J U Linder, R E Pearlman, C Kung, J Forney, B H Satir, J L Van Houten, A M Keller, M Froissard, L Sperling, J Cohen.   

Abstract

A consortium of laboratories undertook a pilot sequencing project to gain insight into the genome of Paramecium. Plasmid-end sequencing of DNA fragments from the somatic nucleus together with similarity searches identified 722 potential protein-coding genes. High gene density and uniform small intron size make random sequencing of somatic chromosomes a cost-effective strategy for gene discovery in this organism.

Mesh:

Substances:

Year:  2001        PMID: 11377780     DOI: 10.1016/s0168-9525(01)02307-1

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  17 in total

1.  PAK paradox: Paramecium appears to have more K(+)-channel genes than humans.

Authors:  W John Haynes; Kit-Yin Ling; Yoshiro Saimi; Ching Kung
Journal:  Eukaryot Cell       Date:  2003-08

Review 2.  Ion channels in microbes.

Authors:  Boris Martinac; Yoshiro Saimi; Ching Kung
Journal:  Physiol Rev       Date:  2008-10       Impact factor: 37.312

3.  K(+)-channel transgenes reduce K(+) currents in Paramecium, probably by a post-translational mechanism.

Authors:  K Y Ling; W J Haynes; L Oesterle; C Kung; R R Preston; Y Saimi
Journal:  Genetics       Date:  2001-11       Impact factor: 4.562

4.  808-nm laser therapy with a flat-top handpiece photobiomodulates mitochondria activities of Paramecium primaurelia (Protozoa).

Authors:  Andrea Amaroli; Silvia Ravera; Steven Parker; Isabella Panfoli; Alberico Benedicenti; Stefano Benedicenti
Journal:  Lasers Med Sci       Date:  2016-03-16       Impact factor: 3.161

5.  A developmentally regulated gene, ASI2, is required for endocycling in the macronuclear anlagen of Tetrahymena.

Authors:  Lihui Yin; Susan T Gater; Kathleen M Karrer
Journal:  Eukaryot Cell       Date:  2010-07-23

6.  Coding properties of Oxytricha trifallax (Sterkiella histriomuscorum) macronuclear chromosomes: analysis of a pilot genome project.

Authors:  Andre R O Cavalcanti; Nicholas A Stover; Lorenzo Orecchia; Thomas G Doak; Laura F Landweber
Journal:  Chromosoma       Date:  2004-07-16       Impact factor: 4.316

7.  Molecular identification of a calcium-inhibited catalytic subunit of casein kinase type 2 from Paramecium tetraurelia.

Authors:  Daniel Vetter; Roland Kissmehl; Tilman Treptau; Karin Hauser; Josef Kellermann; Helmut Plattner
Journal:  Eukaryot Cell       Date:  2003-12

8.  Novel types of Ca2+ release channels participate in the secretory cycle of Paramecium cells.

Authors:  Eva-Maria Ladenburger; Ivonne M Sehring; Iris Korn; Helmut Plattner
Journal:  Mol Cell Biol       Date:  2009-04-20       Impact factor: 4.272

9.  N-ethylmaleimide-sensitive factor is required to organize functional exocytotic microdomains in paramecium.

Authors:  Marine Froissard; Roland Kissmehl; Jean-Claude Dedieu; Tadeusz Gulik-Krzywicki; Helmut Plattner; Jean Cohen
Journal:  Genetics       Date:  2002-06       Impact factor: 4.562

10.  Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities.

Authors:  Thorsten Stoeck; Anke Behnke; Richard Christen; Linda Amaral-Zettler; Maria J Rodriguez-Mora; Andrei Chistoserdov; William Orsi; Virginia P Edgcomb
Journal:  BMC Biol       Date:  2009-11-03       Impact factor: 7.431

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.