Literature DB >> 11377715

A new ultrasensitive assay for quantitation of HIV-1 RNA in plasma.

J Johanson1, K Abravaya, W Caminiti, D Erickson, R Flanders, G Leckie, E Marshall, C Mullen, Y Ohhashi, R Perry, J Ricci, J Salituro, A Smith, N Tang, M Vi, J Robinson.   

Abstract

Nucleic acid-based diagnostic assays for the quantitation of plasma HIV-1 RNA levels are used to monitor disease progression and the response of patients to antiretroviral drug therapy. The LCx HIV RNA Quantitative Assay (Abbott Laboratories, North Chicago, IL) is an assay for the quantitation of HIV type 1 RNA in plasma that uses competitive reverse transcription PCR (RT-PCR) followed by Microparticle Enzyme Immunoassay, and includes an internal control for inhibition and RNA recovery, that is taken through the entire sample preparation procedure. The performance of the assay was assessed for 1 and 0.2 ml sample volumes. For a 1 ml sample volume, the lower limit of detection was found to be 50 copies/ml with a linear range from 50 to 1 million copies/ml. For a 0.2 ml sample volume, the lower limit of detection was found to be 178 copies/ml with a linear range from 178 to 5 million copies/ml. The assay is able to detect and quantitate HIV subtypes A-G and group O. LCx HIV RNA assay quantitation results are highly correlated to the standard and ultrasensitive Amplicor HIV-1 Monitor assay (Roche Molecular Systems) quantitation results. Assay performance is consistent with the use of this test for routine quantitation of HIV-1 RNA in plasma.

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Year:  2001        PMID: 11377715     DOI: 10.1016/s0166-0934(01)00297-x

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  10 in total

1.  Comparative performance of three viral load assays on human immunodeficiency virus type 1 (HIV-1) isolates representing group M (subtypes A to G) and group O: LCx HIV RNA quantitative, AMPLICOR HIV-1 MONITOR version 1.5, and Quantiplex HIV-1 RNA version 3.0.

Authors:  P Swanson; V Soriano; S G Devare; J Hackett
Journal:  J Clin Microbiol       Date:  2001-03       Impact factor: 5.948

2.  Comparison of the LCx human immunodeficiency virus (HIV) RNA quantitative, RealTime HIV, and COBAS AmpliPrep-COBAS TaqMan assays for quantitation of HIV type 1 RNA in plasma.

Authors:  Vincent Foulongne; Brigitte Montes; Marie-Noelle Didelot-Rousseau; Michel Segondy
Journal:  J Clin Microbiol       Date:  2006-08       Impact factor: 5.948

3.  Impact of human immunodeficiency virus type 1 (HIV-1) genetic diversity on performance of four commercial viral load assays: LCx HIV RNA Quantitative, AMPLICOR HIV-1 MONITOR v1.5, VERSANT HIV-1 RNA 3.0, and NucliSens HIV-1 QT.

Authors:  Priscilla Swanson; Carmen de Mendoza; Yagnya Joshi; Alan Golden; Richard L Hodinka; Vincent Soriano; Sushil G Devare; John Hackett
Journal:  J Clin Microbiol       Date:  2005-08       Impact factor: 5.948

4.  High throughput screening for spores and vegetative forms of pathogenic B. anthracis by an internally controlled real-time PCR assay with automated DNA preparation.

Authors:  Marcus Panning; Stefanie Kramme; Nadine Petersen; Christian Drosten
Journal:  Med Microbiol Immunol       Date:  2006-11-09       Impact factor: 3.402

5.  Evaluation of automated sample preparation and quantitative PCR LCx assay for determination of human immunodeficiency virus type 1 RNA.

Authors:  Zsofia Muller; Evelyn Stelzl; Michael Bozic; Josef Haas; Egon Marth; Harald H Kessler
Journal:  J Clin Microbiol       Date:  2004-04       Impact factor: 5.948

6.  Performance of the Celera Diagnostics ViroSeq HIV-1 Genotyping System for sequence-based analysis of diverse human immunodeficiency virus type 1 strains.

Authors:  Susan H Eshleman; John Hackett; Priscilla Swanson; Shawn P Cunningham; Birgit Drews; Catherine Brennan; Sushil G Devare; Léopold Zekeng; Lazare Kaptué; Natalia Marlowe
Journal:  J Clin Microbiol       Date:  2004-06       Impact factor: 5.948

7.  Evaluation of the Abbott m2000rt RealTime HIV-1 assay with manual sample preparation compared with the ROCHE COBAS AmpliPrep/AMPLICOR HIV-1 MONITOR v1.5 using specimens from East Africa.

Authors:  John A Crump; Lesley E Scott; Emma Msuya; Anne B Morrissey; Ekyafyose E Kimaro; John F Shao; Wendy S Stevens
Journal:  J Virol Methods       Date:  2009-09-01       Impact factor: 2.014

8.  Comparative evaluation of the performance of the Abbott RealTime HIV-1 assay for measurement of HIV-1 plasma viral load on genetically diverse samples from Greece.

Authors:  Antigoni Katsoulidou; Chrysoula Rokka; Catherine Issaris; Catherine Haida; Kimon Tzannis; Vana Sypsa; Maria Detsika; Dimitrios Paraskevis; Angelos Hatzakis
Journal:  Virol J       Date:  2011-01-11       Impact factor: 4.099

9.  Thermodynamically modulated partially double-stranded linear DNA probe design for homogeneous real-time PCR.

Authors:  Shihai Huang; John Salituro; Ning Tang; Ka-Cheung Luk; John Hackett; Priscilla Swanson; Gavin Cloherty; Wai-Bing Mak; John Robinson; Klara Abravaya
Journal:  Nucleic Acids Res       Date:  2007-08-09       Impact factor: 16.971

10.  Assessment of HTLV-I proviral load, HIV viral load and CD4 T cell count in infected subjects; with an emphasis on viral replication in co-infection.

Authors:  Hossein Rahimi; Seyyed Abdolrahim Rezaee; Narges Valizade; Rosita Vakili; Houshang Rafatpanah
Journal:  Iran J Basic Med Sci       Date:  2014-01       Impact factor: 2.699

  10 in total

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