Literature DB >> 11376990

Sequence polymorphism of mitochondrial D-loop DNA in the Taiwanese Han population.

L C Tsai1, C Y Lin, J C Lee, J G Chang, A Linacre, W Goodwin.   

Abstract

In order to demonstrate the sequence diversity of mitochondrial D-loop DNA in the Taiwanese Han population, we established a database of 155 unrelated individuals. For each individual, the complete 980bp DNA region from the 5' end of HVI to 3' end of HVII segment was sequenced. In these 155 sequence data, 149 different haplotypes were observed, amongst these haplotypes, 144 were unique, 4 were found in 2 individuals and 1 was found in 3 individuals. When compare to the Anderson sequence, 144 transitions, 24 transversions, 5 insertions and 5 deletions were found. Eight positions exhibited more than one polymorphic sequence, six exhibited two variants while two exhibited three variants. Over the 1024bp that was analysed, pairwise differences between the sequences were 11.35+/-3.53bp. The sequence and nucleotide diversity were 0.9994 and 0.0116, respectively. The probability of two individuals randomly matching over the entire control region was 0.007. The diversity in the mitochondrial D-loop indicates the value of this locus for casework within Taiwan.

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Substances:

Year:  2001        PMID: 11376990     DOI: 10.1016/s0379-0738(00)00439-4

Source DB:  PubMed          Journal:  Forensic Sci Int        ISSN: 0379-0738            Impact factor:   2.395


  14 in total

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2.  The fingerprint of phantom mutations in mitochondrial DNA data.

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Journal:  Int J Legal Med       Date:  2003-07-05       Impact factor: 2.686

5.  Mitochondrial genome variation in eastern Asia and the peopling of Japan.

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Journal:  Genome Res       Date:  2004-10       Impact factor: 9.043

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9.  Phylogeographic analysis of mitochondrial DNA haplogroup F2 in China reveals T12338C in the initiation codon of the ND5 gene not to be pathogenic.

Authors:  Qing-Peng Kong; Yong-Gang Yao; Chang Sun; Chun-Ling Zhu; Li Zhong; Cheng-Ye Wang; Wang-Wei Cai; Xiang-Min Xu; An-Long Xu; Ya-Ping Zhang
Journal:  J Hum Genet       Date:  2004-07-22       Impact factor: 3.172

10.  Maternal footprints of Southeast Asians in North India.

Authors:  Kumarasamy Thangaraj; Gyaneshwer Chaubey; Toomas Kivisild; Deepa Selvi Rani; Vijay Kumar Singh; Thanseem Ismail; Denise Carvalho-Silva; Mait Metspalu; L V K S Bhaskar; Alla G Reddy; Sarat Chandra; Veena Pande; B Prathap Naidu; Niharika Adarsh; Abhilasha Verma; Inaganti Amara Jyothi; Chandana Basu Mallick; Nidhi Shrivastava; Ragala Devasena; Babita Kumari; Amit Kumar Singh; Shailendra Kumar Dhar Dwivedi; Shefali Singh; Geeta Rao; Pranav Gupta; Vartika Sonvane; Kavita Kumari; Afsar Basha; K R Bhargavi; Albert Lalremruata; Arvind Kumar Gupta; Gurukamal Kaur; K K Reddy; A Papa Rao; Richard Villems; Chris Tyler-Smith; Lalji Singh
Journal:  Hum Hered       Date:  2008-01-28       Impact factor: 0.444

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