Literature DB >> 11375933

New insights into the activation of o-xylene biodegradation in Pseudomonas stutzeri OX1 by pathway substrates.

F L Arenghi1, P Barbieri, G Bertoni, V de Lorenzo.   

Abstract

The regulation of the tou operon of Pseudomonas stutzeri OX1, for degradation of toluene and o-xylene via phenolic intermediates, has been faithfully reconstructed in vitro with purified proteins. The set-up included the prokaryotic enhancer-binding protein TouR, the sigma54-dependent PToMO promoter and the sigma54-containing RNA polymerase. With this system we prove that direct binding of 2-methylphenol (o-cresol) to TouR is the only regulatory step for activation of PToMO in response to aromatic effectors, thereby ruling out the involvement of other factors or a need for protein processing. In addition, we found that while TouR failed entirely to activate PToMO in the absence of inducers, the protein had per se a very significant ATPase activity, which was only moderately increased by o-cresol addition. The results presented here support the view that TouR-like proteins are particularly suitable as evolutionary assets to endow recently evolved pathways for the degradation of environmental pollutants with an optimal degree of transcriptional regulation.

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Year:  2001        PMID: 11375933      PMCID: PMC1083886          DOI: 10.1093/embo-reports/kve092

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  31 in total

1.  The bacterial enhancer-binding protein NTRC is a molecular machine: ATP hydrolysis is coupled to transcriptional activation.

Authors:  A Wedel; S Kustu
Journal:  Genes Dev       Date:  1995-08-15       Impact factor: 11.361

2.  In vitro activities of an N-terminal truncated form of XylR, a sigma 54-dependent transcriptional activator of Pseudomonas putida.

Authors:  J Pérez-Martín; V de Lorenzo
Journal:  J Mol Biol       Date:  1996-05-17       Impact factor: 5.469

Review 3.  Signal sensing by sigma 54-dependent regulators: derepression as a control mechanism.

Authors:  V Shingler
Journal:  Mol Microbiol       Date:  1996-02       Impact factor: 3.501

4.  Genetic evidence for interdomain regulation of the phenol-responsive final sigma54-dependent activator DmpR.

Authors:  L C Ng; E O'Neill; V Shingler
Journal:  J Biol Chem       Date:  1996-07-19       Impact factor: 5.157

5.  Activation of the transcriptional regulator XylR of Pseudomonas putida by release of repression between functional domains.

Authors:  S Fernández; V de Lorenzo; J Pérez-Martín
Journal:  Mol Microbiol       Date:  1995-04       Impact factor: 3.501

6.  The amino-terminal domain of the prokaryotic enhancer-binding protein XylR is a specific intramolecular repressor.

Authors:  J Pérez-Martín; V De Lorenzo
Journal:  Proc Natl Acad Sci U S A       Date:  1995-09-26       Impact factor: 11.205

7.  Direct regulation of the ATPase activity of the transcriptional activator DmpR by aromatic compounds.

Authors:  V Shingler; H Pavel
Journal:  Mol Microbiol       Date:  1995-08       Impact factor: 3.501

8.  Mechanism of activation of a response regulator: interaction of NtrC-P dimers induces ATPase activity.

Authors:  I Mettke; U Fiedler; V Weiss
Journal:  J Bacteriol       Date:  1995-09       Impact factor: 3.490

9.  Genetic evidence for activation of the positive transcriptional regulator Xy1R, a member of the NtrC family of regulators, by effector binding.

Authors:  A Delgado; J L Ramos
Journal:  J Biol Chem       Date:  1994-03-18       Impact factor: 5.157

10.  Cross-regulation by XylR and DmpR activators of Pseudomonas putida suggests that transcriptional control of biodegradative operons evolves independently of catabolic genes.

Authors:  S Fernández; V Shingler; V De Lorenzo
Journal:  J Bacteriol       Date:  1994-08       Impact factor: 3.490

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  11 in total

1.  Identification and physical characterization of the HbpR binding sites of the hbpC and hbpD promoters.

Authors:  David Tropel; Jan Roelof van der Meer
Journal:  J Bacteriol       Date:  2002-06       Impact factor: 3.490

2.  Discovery of an Inducible Toluene Monooxygenase That Cooxidizes 1,4-Dioxane and 1,1-Dichloroethylene in Propanotrophic Azoarcus sp. Strain DD4.

Authors:  Daiyong Deng; Dung Ngoc Pham; Fei Li; Mengyan Li
Journal:  Appl Environ Microbiol       Date:  2020-08-18       Impact factor: 4.792

Review 3.  Bacterial transcriptional regulators for degradation pathways of aromatic compounds.

Authors:  David Tropel; Jan Roelof van der Meer
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

Review 4.  Biology of Pseudomonas stutzeri.

Authors:  Jorge Lalucat; Antoni Bennasar; Rafael Bosch; Elena García-Valdés; Norberto J Palleroni
Journal:  Microbiol Mol Biol Rev       Date:  2006-06       Impact factor: 11.056

5.  Monitoring intracellular levels of XylR in Pseudomonas putida with a single-chain antibody specific for aromatic-responsive enhancer-binding proteins.

Authors:  S Fraile; F Roncal; L A Fernández; V de Lorenzo
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

6.  TouR-mediated effector-independent growth phase-dependent activation of the sigma54 Ptou promoter of Pseudomonas stutzeri OX1.

Authors:  Dafne Solera; Fabio L G Arenghi; Tanja Woelk; Enrica Galli; Paola Barbieri
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

7.  Taxonomic profiling and metagenome analysis of a microbial community from a habitat contaminated with industrial discharges.

Authors:  Varun Shah; Martha Zakrzewski; Daniel Wibberg; Felix Eikmeyer; Andreas Schlüter; Datta Madamwar
Journal:  Microb Ecol       Date:  2013-10       Impact factor: 4.552

8.  Characterisation of the putative effector interaction site of the regulatory HbpR protein from Pseudomonas azelaica by site-directed mutagenesis.

Authors:  Christelle Vogne; Hansi Bisht; Sagrario Arias; Sofia Fraile; Rup Lal; Jan Roelof van der Meer
Journal:  PLoS One       Date:  2011-02-17       Impact factor: 3.240

9.  Polynucleotide phosphorylase exonuclease and polymerase activities on single-stranded DNA ends are modulated by RecN, SsbA and RecA proteins.

Authors:  Paula P Cardenas; Thomas Carzaniga; Sandro Zangrossi; Federica Briani; Esther Garcia-Tirado; Gianni Dehò; Juan C Alonso
Journal:  Nucleic Acids Res       Date:  2011-08-22       Impact factor: 16.971

10.  Delftia sp. LCW, a strain isolated from a constructed wetland shows novel properties for dimethylphenol isomers degradation.

Authors:  Mónica A Vásquez-Piñeros; Paula M Martínez-Lavanchy; Nico Jehmlich; Dietmar H Pieper; Carlos A Rincón; Hauke Harms; Howard Junca; Hermann J Heipieper
Journal:  BMC Microbiol       Date:  2018-09-06       Impact factor: 3.605

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