Literature DB >> 11375203

Quantitation of viral DNA by real-time PCR applying duplex amplification, internal standardization, and two-color fluorescence detection.

F Gruber1, F G Falkner, F Dorner, T Hämmerle.   

Abstract

A real-time PCR method was developed to quantitate viral DNA that includes duplex amplification, internal standardization, and two-color fluorescence detection without the need to generate an external standardization curve. Applied to human parvovirus B19 DNA, the linear range was from 10(2) to at least 5 x 10(6) copies per ml of sample. The coefficient of variation was 0.29 using a run control of 2,876 copies per ml. The method reduces the risk of false-negative results, yields high precision, and is applicable for other DNA targets.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11375203      PMCID: PMC92947          DOI: 10.1128/AEM.67.6.2837-2839.2001

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  8 in total

1.  Precise quantitation of human parvovirus B19 DNA in biological samples by PCR.

Authors:  F Gruber; F G Falkner; F Dorner; T Hämmerle
Journal:  Biologicals       Date:  1998-09       Impact factor: 1.856

2.  Real time quantitative PCR.

Authors:  C A Heid; J Stevens; K J Livak; P M Williams
Journal:  Genome Res       Date:  1996-10       Impact factor: 9.043

3.  Quantitation of hepatitis B virus genomic DNA by real-time detection PCR.

Authors:  A Abe; K Inoue; T Tanaka; J Kato; N Kajiyama; R Kawaguchi; S Tanaka; M Yoshiba; M Kohara
Journal:  J Clin Microbiol       Date:  1999-09       Impact factor: 5.948

4.  A sensitive PCR assay system for the quantitation of viral genome equivalents: hepatitis C virus (HCV).

Authors:  T Hämmerle; F G Falkner; F Dorner
Journal:  Arch Virol       Date:  1996       Impact factor: 2.574

5.  A sensitive PCR assay system for the quantitation of viral genome equivalents: human immunodeficiency virus type 1 (HIV-1) and hepatitis B virus (HBV).

Authors:  T Hämmerle; M Himmelspach; F Dorner; F G Falkner
Journal:  Arch Virol       Date:  1997       Impact factor: 2.574

6.  Detection and quantitation of human papillomavirus by using the fluorescent 5' exonuclease assay.

Authors:  A Josefsson; K Livak; U Gyllensten
Journal:  J Clin Microbiol       Date:  1999-03       Impact factor: 5.948

7.  Detection of specific polymerase chain reaction product by utilizing the 5'----3' exonuclease activity of Thermus aquaticus DNA polymerase.

Authors:  P M Holland; R D Abramson; R Watson; D H Gelfand
Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-15       Impact factor: 11.205

8.  Development of a high-throughput quantitative assay for detecting herpes simplex virus DNA in clinical samples.

Authors:  A J Ryncarz; J Goddard; A Wald; M L Huang; B Roizman; L Corey
Journal:  J Clin Microbiol       Date:  1999-06       Impact factor: 5.948

  8 in total
  14 in total

Review 1.  Real-time PCR in virology.

Authors:  Ian M Mackay; Katherine E Arden; Andreas Nitsche
Journal:  Nucleic Acids Res       Date:  2002-03-15       Impact factor: 16.971

2.  Detection of Campylobacter spp. in chicken fecal samples by real-time PCR.

Authors:  Marianne Lund; Steen Nordentoft; Karl Pedersen; Mogens Madsen
Journal:  J Clin Microbiol       Date:  2004-11       Impact factor: 5.948

3.  Precision and performance characteristics of bisulfite conversion and real-time PCR (MethyLight) for quantitative DNA methylation analysis.

Authors:  Shuji Ogino; Takako Kawasaki; Mohan Brahmandam; Mami Cantor; Gregory J Kirkner; Donna Spiegelman; G Mike Makrigiorgos; Daniel J Weisenberger; Peter W Laird; Massimo Loda; Charles S Fuchs
Journal:  J Mol Diagn       Date:  2006-05       Impact factor: 5.568

4.  New LightCycler PCR for rapid and sensitive quantification of parvovirus B19 DNA guides therapeutic decision-making in relapsing infections.

Authors:  T C Harder; M Hufnagel; K Zahn; K Beutel; H J Schmitt; U Ullmann; P Rautenberg
Journal:  J Clin Microbiol       Date:  2001-12       Impact factor: 5.948

5.  Development and application of a real-time PCR approach for quantification of uncultured bacteria in the central Baltic Sea.

Authors:  Matthias Labrenz; Ingrid Brettar; Richard Christen; Sebastien Flavier; Julia Bötel; Manfred G Höfle
Journal:  Appl Environ Microbiol       Date:  2004-08       Impact factor: 4.792

Review 6.  Viral myocarditis: from experimental models to molecular diagnosis in patients.

Authors:  Sabine Pankuweit; Karin Klingel
Journal:  Heart Fail Rev       Date:  2013-11       Impact factor: 4.214

7.  Evidence for a direct link between glutathione biosynthesis and stress defense gene expression in Arabidopsis.

Authors:  Louise Ball; Gian-Paolo Accotto; Ulrike Bechtold; Gary Creissen; Dietmar Funck; Ana Jimenez; Baldeep Kular; Nicola Leyland; Jaime Mejia-Carranza; Helen Reynolds; Stanislaw Karpinski; Philip M Mullineaux
Journal:  Plant Cell       Date:  2004-08-12       Impact factor: 11.277

8.  The durum wheat annexin, TdAnn6, improves salt and osmotic stress tolerance in Arabidopsis via modulation of antioxidant machinery.

Authors:  Marwa Harbaoui; Walid Ben Romdhane; Anis Ben Hsouna; Faiçal Brini; Rania Ben Saad
Journal:  Protoplasma       Date:  2021-02-16       Impact factor: 3.356

9.  Time-Series Transcriptomics Reveals That AGAMOUS-LIKE22 Affects Primary Metabolism and Developmental Processes in Drought-Stressed Arabidopsis.

Authors:  Ulrike Bechtold; Christopher A Penfold; Dafyd J Jenkins; Roxane Legaie; Jonathan D Moore; Tracy Lawson; Jack S A Matthews; Silvere R M Vialet-Chabrand; Laura Baxter; Sunitha Subramaniam; Richard Hickman; Hannah Florance; Christine Sambles; Deborah L Salmon; Regina Feil; Laura Bowden; Claire Hill; Neil R Baker; John E Lunn; Bärbel Finkenstädt; Andrew Mead; Vicky Buchanan-Wollaston; Jim Beynon; David A Rand; David L Wild; Katherine J Denby; Sascha Ott; Nicholas Smirnoff; Philip M Mullineaux
Journal:  Plant Cell       Date:  2016-02-03       Impact factor: 11.277

10.  Accelerated flowering time reduces lifetime water use without penalizing reproductive performance in Arabidopsis.

Authors:  John N Ferguson; Rhonda C Meyer; Kieron D Edwards; Matt Humphry; Oliver Brendel; Ulrike Bechtold
Journal:  Plant Cell Environ       Date:  2019-03-12       Impact factor: 7.228

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.