Literature DB >> 11374888

An in vivo approach to identifying sequence context of 8-oxoguanine mutagenesis.

T Watanabe1, T Nunoshiba, M Kawata, K Yamamoto.   

Abstract

Base substitution mutations are not distributed randomly in that most are located at a few specific hotspots sites. We have been studying 7,8-dihydro-8-oxoguanine mutagenesis in Escherichia coli in the supF gene carried in a plasmid. Among hotspots, guanine within the 5'-AGA-3' located in the anticodon site was susceptible to the induction of G:C-->T:A transversion. In this study, we constructed variants of the supF gene in which the hotspot 5'-AGA-3' was modified to 5'-AGT-3', 5'-AGG-3' and 5'-AGC-3' to determine the influence of 3' neighboring base on G:C-->T:A mutational activity. Using these variant supF genes propagated in a 7,8-dihydro-8-oxoguanine repair-deficient host, we found that guanine within 5'-AGA-3' and 5'-AGG-3' produce G:C-->T:A, but guanine within 5'-AGT-3' and 5'-AGC-3' reduce the formation of G:C-->T:A. These changes were thus due to the effect of sequence context on the efficiency of mutation formation at the sites of 7,8-dihydro-8-oxoguanine. We also observed a longer range base-pair effect on hotspot formation. Copyright 2001 Academic Press.

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Year:  2001        PMID: 11374888     DOI: 10.1006/bbrc.2001.4946

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  3 in total

1.  Sequence-dependent variation in the reactivity of 8-Oxo-7,8-dihydro-2'-deoxyguanosine toward oxidation.

Authors:  Kok Seong Lim; Koli Taghizadeh; John S Wishnok; I Ramesh Babu; Vladimir Shafirovich; Nicholas E Geacintov; Peter C Dedon
Journal:  Chem Res Toxicol       Date:  2011-12-02       Impact factor: 3.739

2.  Sequence-dependent structural variation in DNA undergoing intrahelical inspection by the DNA glycosylase MutM.

Authors:  Rou-Jia Sung; Michael Zhang; Yan Qi; Gregory L Verdine
Journal:  J Biol Chem       Date:  2012-03-30       Impact factor: 5.157

3.  Sequence context effects of replication of Fapy•dG in three mutational hot spot sequences of the p53 gene in human cells.

Authors:  Jan Henric T Bacurio; Haozhe Yang; Spandana Naldiga; Brent V Powell; Benjamin J Ryan; Bret D Freudenthal; Marc M Greenberg; Ashis K Basu
Journal:  DNA Repair (Amst)       Date:  2021-08-16
  3 in total

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