Literature DB >> 11371636

Solution structure of DFF40 and DFF45 N-terminal domain complex and mutual chaperone activity of DFF40 and DFF45.

P Zhou1, A A Lugovskoy, J S McCarty, P Li, G Wagner.   

Abstract

Apoptotic DNA fragmentation is mediated by a caspase-activated DNA fragmentation factor (DFF)40. Expression and folding of DFF40 require the presence of DFF45, which also acts as a nuclease inhibitor before DFF40 activation by execution caspases. The N-terminal domains (NTDs) of both proteins are homologous, and their interaction plays a key role in the proper functioning of this two-component system. Here we report that the NTD of DFF45 alone is unstructured in solution, and its folding is induced upon binding to DFF40 NTD. Therefore, folding of both proteins regulates the formation of the DFF40/DFF45 complex. The solution structure of the heterodimeric complex between NTDs of DFF40 and DFF45 reported here shows that the mutual chaperoning includes the formation of an extensive network of intermolecular interactions that bury a hydrophobic cluster inside the interface, surrounded by intermolecular salt bridges.

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Year:  2001        PMID: 11371636      PMCID: PMC33420          DOI: 10.1073/pnas.111145098

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  21 in total

1.  The 40-kDa subunit of DNA fragmentation factor induces DNA fragmentation and chromatin condensation during apoptosis.

Authors:  X Liu; P Li; P Widlak; H Zou; X Luo; W T Garrard; X Wang
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-21       Impact factor: 11.205

2.  CIDE, a novel family of cell death activators with homology to the 45 kDa subunit of the DNA fragmentation factor.

Authors:  N Inohara; T Koseki; S Chen; X Wu; G Núñez
Journal:  EMBO J       Date:  1998-05-01       Impact factor: 11.598

3.  CPAN, a human nuclease regulated by the caspase-sensitive inhibitor DFF45.

Authors:  R Halenbeck; H MacDonald; A Roulston; T T Chen; L Conroy; L T Williams
Journal:  Curr Biol       Date:  1998-04-23       Impact factor: 10.834

4.  Torsion angle dynamics for NMR structure calculation with the new program DYANA.

Authors:  P Güntert; C Mumenthaler; K Wüthrich
Journal:  J Mol Biol       Date:  1997-10-17       Impact factor: 5.469

5.  Design of an expression system for detecting folded protein domains and mapping macromolecular interactions by NMR.

Authors:  J R Huth; C A Bewley; B M Jackson; A G Hinnebusch; G M Clore; A M Gronenborn
Journal:  Protein Sci       Date:  1997-11       Impact factor: 6.725

6.  Multiple domains of DFF45 bind synergistically to DFF40: roles of caspase cleavage and sequestration of activator domain of DFF40.

Authors:  J S McCarty; S Y Toh; P Li
Journal:  Biochem Biophys Res Commun       Date:  1999-10-14       Impact factor: 3.575

7.  A caspase-activated DNase that degrades DNA during apoptosis, and its inhibitor ICAD.

Authors:  M Enari; H Sakahira; H Yokoyama; K Okawa; A Iwamatsu; S Nagata
Journal:  Nature       Date:  1998-01-01       Impact factor: 49.962

8.  Cleavage of CAD inhibitor in CAD activation and DNA degradation during apoptosis.

Authors:  H Sakahira; M Enari; S Nagata
Journal:  Nature       Date:  1998-01-01       Impact factor: 49.962

Review 9.  Apoptosis in the pathogenesis and treatment of disease.

Authors:  C B Thompson
Journal:  Science       Date:  1995-03-10       Impact factor: 47.728

10.  Support of 1H NMR assignments in proteins by biosynthetically directed fractional 13C-labeling.

Authors:  T Szyperski; D Neri; B Leiting; G Otting; K Wüthrich
Journal:  J Biomol NMR       Date:  1992-07       Impact factor: 2.835

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  37 in total

Review 1.  Natively unfolded proteins: a point where biology waits for physics.

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Journal:  Protein Sci       Date:  2002-04       Impact factor: 6.725

Review 2.  The protein structures that shape caspase activity, specificity, activation and inhibition.

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Journal:  Biochem J       Date:  2004-12-01       Impact factor: 3.857

3.  Crystallization and preliminary X-ray crystallographic studies of Drep-3, a DFF-related protein from Drosophila melanogaster.

Authors:  Hyun Ho Park; Hansel Emory Tookes; Hao Wu
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-05-31

4.  Functional characterization and conformational analysis of the Herpesvirus saimiri Tip-C484 protein.

Authors:  Jennifer L Mitchell; Ronald P Trible; Lori A Emert-Sedlak; David D Weis; Edwina C Lerner; Jeremy J Applen; Bartholomew M Sefton; Thomas E Smithgall; John R Engen
Journal:  J Mol Biol       Date:  2006-12-16       Impact factor: 5.469

5.  Molecular cloning, chromosomal location and expression pattern of porcine CIDEa and CIDEc.

Authors:  Y H Li; T Lei; X D Chen; T Xia; Y Peng; Q Q Long; J Zhang; S Q Feng; L Zhou; Z Q Yang
Journal:  Mol Biol Rep       Date:  2008-03-03       Impact factor: 2.316

6.  CIDE domains form functionally important higher-order assemblies for DNA fragmentation.

Authors:  Jae Young Choi; Qi Qiao; Se-Hoon Hong; Chang Min Kim; Jae-Hee Jeong; Yeon-Gil Kim; Yong-Keun Jung; Hao Wu; Hyun Ho Park
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-26       Impact factor: 11.205

Review 7.  Structural metamorphism and polymorphism in proteins on the brink of thermodynamic stability.

Authors:  Prakash Kulkarni; Tsega L Solomon; Yanan He; Yihong Chen; Philip N Bryan; John Orban
Journal:  Protein Sci       Date:  2018-09-24       Impact factor: 6.725

8.  Segmental isotope labeling of proteins for NMR structural study using a protein S tag for higher expression and solubility.

Authors:  Hiroshi Kobayashi; G V T Swapna; Kuen-Phon Wu; Yuliya Afinogenova; Kenith Conover; Binchen Mao; Gaetano T Montelione; Masayori Inouye
Journal:  J Biomol NMR       Date:  2012-03-03       Impact factor: 2.835

Review 9.  Structural genomics plucks high-hanging membrane proteins.

Authors:  Edda Kloppmann; Marco Punta; Burkhard Rost
Journal:  Curr Opin Struct Biol       Date:  2012-05-21       Impact factor: 6.809

10.  Bcl-2 siRNA augments taxol mediated apoptotic death in human glioblastoma U138MG and U251MG cells.

Authors:  Joseph George; Naren L Banik; Swapan K Ray
Journal:  Neurochem Res       Date:  2008-03-21       Impact factor: 3.996

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