Literature DB >> 11371587

Evidence for the non-quasispecies evolution of RNA viruses [corrected].

G M Jenkins1, M Worobey, C H Woelk, E C Holmes.   

Abstract

The quasispecies model of RNA virus evolution differs from those formulated in conventional population genetics in that neutral mutations do not lead to genetic drift of the population, and natural selection acts on the mutant distribution as a whole rather than on individual variants. By computer simulation, we show that this model could be inappropriate for many RNA viruses because the neutral sequence space may be too large to allow the formation of a quasispecies distribution. This view is supported by our analysis of gene sequences from vesicular stomatitis virus, which is considered a prototype RNA virus quasispecies. Our results are relevant to the evolution of RNA systems in general.

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Year:  2001        PMID: 11371587     DOI: 10.1093/oxfordjournals.molbev.a003900

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  23 in total

1.  Is the quasispecies concept relevant to RNA viruses?

Authors:  Edward C Holmes; Andrés Moya
Journal:  J Virol       Date:  2002-01       Impact factor: 5.103

2.  Structure and temporal dynamics of populations within wheat streak mosaic virus isolates.

Authors:  J S Hall; R French; T J Morris; D C Stenger
Journal:  J Virol       Date:  2001-11       Impact factor: 5.103

3.  Probability of fixation of an advantageous mutant in a viral quasispecies.

Authors:  Claus O Wilke
Journal:  Genetics       Date:  2003-02       Impact factor: 4.562

4.  Molecular basis of adaptive convergence in experimental populations of RNA viruses.

Authors:  José M Cuevas; Santiago F Elena; Andrés Moya
Journal:  Genetics       Date:  2002-10       Impact factor: 4.562

5.  The distribution of fitness effects caused by single-nucleotide substitutions in an RNA virus.

Authors:  Rafael Sanjuán; Andrés Moya; Santiago F Elena
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-24       Impact factor: 11.205

6.  Computational design of antiviral RNA interference strategies that resist human immunodeficiency virus escape.

Authors:  Joshua N Leonard; David V Schaffer
Journal:  J Virol       Date:  2005-02       Impact factor: 5.103

7.  Mutations leading to loss of sporulation ability in Bacillus subtilis are sufficiently frequent to favor genetic canalization.

Authors:  Joanna Masel; Heather Maughan
Journal:  Genetics       Date:  2006-11-16       Impact factor: 4.562

Review 8.  The fixation probability of beneficial mutations.

Authors:  Z Patwa; L M Wahl
Journal:  J R Soc Interface       Date:  2008-11-06       Impact factor: 4.118

Review 9.  Within-host nucleotide diversity of virus populations: insights from next-generation sequencing.

Authors:  Chase W Nelson; Austin L Hughes
Journal:  Infect Genet Evol       Date:  2014-12-04       Impact factor: 3.342

10.  Mosquitoes put the brake on arbovirus evolution: experimental evolution reveals slower mutation accumulation in mosquito than vertebrate cells.

Authors:  Nikos Vasilakis; Eleanor R Deardorff; Joan L Kenney; Shannan L Rossi; Kathryn A Hanley; Scott C Weaver
Journal:  PLoS Pathog       Date:  2009-06-05       Impact factor: 6.823

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