Literature DB >> 11371178

Regulation of the eukaryotic cell cycle: molecular antagonism, hysteresis, and irreversible transitions.

J J Tyson1, B Novak.   

Abstract

In recent years, molecular biologists have uncovered a wealth of information about the proteins controlling cell growth and division in eukaryotes. The regulatory system is so complex that it defies understanding by verbal arguments alone. Quantitative tools are necessary to probe reliably into the details of cell cycle control. To this end, we convert hypothetical molecular mechanisms into sets of nonlinear ordinary differential equations and use standard analytical and numerical methods to study their solutions. First, we present a simple model of the antagonistic interactions between cyclin-dependent kinases and the anaphase promoting complex, which shows how progress through the cell cycle can be thought of as irreversible transitions (Start and Finish) between two stable states (G1 and S-G2-M) of the regulatory system. Then we add new pieces to the "puzzle" until we obtain reasonable models of the control systems in yeast cells, frog eggs, and cultured mammalian cells. Copyright 2001 Academic Press.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11371178     DOI: 10.1006/jtbi.2001.2293

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  88 in total

1.  Control analysis for autonomously oscillating biochemical networks.

Authors:  Karin A Reijenga; Hans V Westerhoff; Boris N Kholodenko; Jacky L Snoep
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

2.  Dynamics of the cell cycle: checkpoints, sizers, and timers.

Authors:  Zhilin Qu; W Robb MacLellan; James N Weiss
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

3.  Hysteresis drives cell-cycle transitions in Xenopus laevis egg extracts.

Authors:  Wei Sha; Jonathan Moore; Katherine Chen; Antonio D Lassaletta; Chung-Seon Yi; John J Tyson; Jill C Sible
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-30       Impact factor: 11.205

4.  Multisite phosphorylation and network dynamics of cyclin-dependent kinase signaling in the eukaryotic cell cycle.

Authors:  Ling Yang; W Robb MacLellan; Zhangang Han; James N Weiss; Zhilin Qu
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

5.  Integrative analysis of cell cycle control in budding yeast.

Authors:  Katherine C Chen; Laurence Calzone; Attila Csikasz-Nagy; Frederick R Cross; Bela Novak; John J Tyson
Journal:  Mol Biol Cell       Date:  2004-05-28       Impact factor: 4.138

6.  Hybrid modeling and simulation of stochastic effects on progression through the eukaryotic cell cycle.

Authors:  Zhen Liu; Yang Pu; Fei Li; Clifford A Shaffer; Stefan Hoops; John J Tyson; Yang Cao
Journal:  J Chem Phys       Date:  2012-01-21       Impact factor: 3.488

7.  Regulation of oscillation dynamics in biochemical systems with dual negative feedback loops.

Authors:  Lan K Nguyen
Journal:  J R Soc Interface       Date:  2012-03-14       Impact factor: 4.118

8.  Computational modeling of signaling pathways mediating cell cycle checkpoint control and apoptotic responses to ionizing radiation-induced DNA damage.

Authors:  Yuchao Zhao; In Chio Lou; Rory B Conolly
Journal:  Dose Response       Date:  2011-10-25       Impact factor: 2.658

9.  Cullin 4-ring finger-ligase plays a key role in the control of endoreplication cycles in Arabidopsis trichomes.

Authors:  Farshad Roodbarkelari; Jonathan Bramsiepe; Christina Weinl; Sebastian Marquardt; Béla Novák; Marc J Jakoby; Esther Lechner; Pascal Genschik; Arp Schnittger
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-09       Impact factor: 11.205

10.  Potential and flux landscapes quantify the stability and robustness of budding yeast cell cycle network.

Authors:  Jin Wang; Chunhe Li; Erkang Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-14       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.