Literature DB >> 11370862

Analysis of Euglena gracilis alpha-, beta- and gamma-tubulin genes: introns and pre-mRNA maturation.

J Canaday1, L H Tessier, P Imbault, F Paulus.   

Abstract

We have cloned and analyzed alpha-, beta- and gamma-tubulin genes from Euglena gracilis. The gamma-tubulin genes are 6-10 times longer than the alpha- and beta-tubulin genes, owing to the presence of numerous introns. These introns are all of the conventional type, whereas the alpha- and beta-tubulin genes contain both conventional and non-conventional introns. This is the first time that both types of introns have been found in the same gene. In the E. gracilis genome there are two genes for each tubulin, but the level of gamma-tubulin mRNA is 60 times lower than that of alpha- and beta-tubulin RNAs. The distinctive structure of gamma-tubulin genes prompted us to investigate the maturation of its pre-mRNA. We show that trans-splicing occurs before the cis-splicing of the first intron of the pre-mRNA and that polyadenylation occurs after the cis-splicing of the last intron of the pre-mRNA. We propose that mRNA processing is likely to play a role in regulating the amounts of different tubulins in E. gracilis.

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Year:  2001        PMID: 11370862     DOI: 10.1007/s004380000403

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  12 in total

1.  A possible role for short introns in the acquisition of stroma-targeting peptides in the flagellate Euglena gracilis.

Authors:  Matej Vesteg; Rostislav Vacula; Jürgen M Steiner; Bianka Mateásiková; Wolfgang Löffelhardt; Brona Brejová; Juraj Krajcovic
Journal:  DNA Res       Date:  2010-06-29       Impact factor: 4.458

2.  Unusual features of fibrillarin cDNA and gene structure in Euglena gracilis: evolutionary conservation of core proteins and structural predictions for methylation-guide box C/D snoRNPs throughout the domain Eucarya.

Authors:  Anthony G Russell; Yoh-ichi Watanabe; J Michael Charette; Michael W Gray
Journal:  Nucleic Acids Res       Date:  2005-05-13       Impact factor: 16.971

3.  A high density of ancient spliceosomal introns in oxymonad excavates.

Authors:  Claudio H Slamovits; Patrick J Keeling
Journal:  BMC Evol Biol       Date:  2006-04-25       Impact factor: 3.260

4.  Evolution of tubulin gene arrays in Trypanosomatid parasites: genomic restructuring in Leishmania.

Authors:  Andrew P Jackson; Sue Vaughan; Keith Gull
Journal:  BMC Genomics       Date:  2006-10-18       Impact factor: 3.969

5.  Intermediate introns in nuclear genes of euglenids - are they a distinct type?

Authors:  Rafał Milanowski; Natalia Gumińska; Anna Karnkowska; Takao Ishikawa; Bożena Zakryś
Journal:  BMC Evol Biol       Date:  2016-02-29       Impact factor: 3.260

6.  U3 snoRNA genes are multi-copy and frequently linked to U5 snRNA genes in Euglena gracilis.

Authors:  J Michael Charette; Michael W Gray
Journal:  BMC Genomics       Date:  2009-11-16       Impact factor: 3.969

7.  Heterotrophic euglenid Rhabdomonas costata resembles its phototrophic relatives in many aspects of molecular and cell biology.

Authors:  Petr Soukal; Štěpánka Hrdá; Anna Karnkowska; Rafał Milanowski; Jana Szabová; Miluše Hradilová; Hynek Strnad; Čestmír Vlček; Ivan Čepička; Vladimír Hampl
Journal:  Sci Rep       Date:  2021-06-22       Impact factor: 4.379

8.  An ancient spliceosomal intron in the ribosomal protein L7a gene (Rpl7a) of Giardia lamblia.

Authors:  Anthony G Russell; Timothy E Shutt; Russell F Watkins; Michael W Gray
Journal:  BMC Evol Biol       Date:  2005-08-18       Impact factor: 3.260

9.  A rapid and simple method of detection of Blepharisma japonicum using PCR and immobilisation on FTA paper.

Authors:  Geoff Hide; Jacqueline M Hughes; Robert McNuff
Journal:  BMC Ecol       Date:  2003-09-30       Impact factor: 2.964

10.  Distribution of conventional and nonconventional introns in tubulin (α and β) genes of euglenids.

Authors:  Rafał Milanowski; Anna Karnkowska; Takao Ishikawa; Bozena Zakryś
Journal:  Mol Biol Evol       Date:  2013-12-02       Impact factor: 16.240

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