Literature DB >> 11356120

Structure and assembly of the spliceosomal snRNPs. Novartis Medal Lecture.

K Nagai1, Y Muto, D A Pomeranz Krummel, C Kambach, T Ignjatovic, S Walke, A Kuglstatter.   

Abstract

The spliceosome is a macromolecular machine that carries out the excision of introns from eukaryotic pre-mRNAs and splicing together of exons. Four large RNA-protein complexes, called the U1, U2, U4/U6 and U5 small nuclear ribonucleoprotein particles (snRNPs), and some non-snRNP proteins assemble around three short conserved sequences within the intron in an ordered manner to form the active spliceosome. We aim to provide insight into the molecular details of the mechanism of pre-mRNA splicing through crystallographic studies of the snRNPs. We have solved the X-ray crystal structure of some snRNP proteins as part of either protein-protein complexes or RNA-protein complexes. These structures have provided an important insight into the overall architecture of the U1 and U2 snRNPs and the mechanisms of RNA-protein and protein-protein recognition.

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Year:  2001        PMID: 11356120     DOI: 10.1042/0300-5127:0290015

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  20 in total

1.  Unique SNP in CD44 intron 1 and its role in breast cancer development.

Authors:  Juhua Zhou; Prakash S Nagarkatti; Yin Zhong; Kim Creek; Jiajia Zhang; Mitzi Nagarkatti
Journal:  Anticancer Res       Date:  2010-04       Impact factor: 2.480

2.  Analysis of the conformational energy landscape of human snRNA with a metric based on tree representation of RNA structures.

Authors:  Junji Kitagawa; Yasuhiro Futamura; Kenji Yamamoto
Journal:  Nucleic Acids Res       Date:  2003-04-01       Impact factor: 16.971

3.  A potential role for initiator-tRNA in pre-mRNA splicing regulation.

Authors:  Eyal Kamhi; Oleg Raitskin; Ruth Sperling; Joseph Sperling
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-07       Impact factor: 11.205

4.  Efficient computation of optimal oligo-RNA binding.

Authors:  Nathan O Hodas; Daniel P Aalberts
Journal:  Nucleic Acids Res       Date:  2004-12-17       Impact factor: 16.971

5.  Structural analysis of protein-RNA interactions with mass spectrometry.

Authors:  Mamuka Kvaratskhelia; Stuart F J Le Grice
Journal:  Methods Mol Biol       Date:  2008

6.  Severe muscle wasting and denervation in mice lacking the RNA-binding protein ZFP106.

Authors:  Douglas M Anderson; Jessica Cannavino; Hui Li; Kelly M Anderson; Benjamin R Nelson; John McAnally; Svetlana Bezprozvannaya; Yun Liu; Weichun Lin; Ning Liu; Rhonda Bassel-Duby; Eric N Olson
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-14       Impact factor: 11.205

7.  G Run-mediated recognition of proteolipid protein and DM20 5' splice sites by U1 small nuclear RNA is regulated by context and proximity to the splice site.

Authors:  Erming Wang; William F Mueller; Klemens J Hertel; Franca Cambi
Journal:  J Biol Chem       Date:  2010-12-02       Impact factor: 5.157

8.  Sequence-specific interaction of U1 snRNA with the SMN complex.

Authors:  Jeongsik Yong; Livio Pellizzoni; Gideon Dreyfuss
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

9.  Lymphotropic Herpesvirus saimiri uses the SMN complex to assemble Sm cores on its small RNAs.

Authors:  Tracey J Golembe; Jeongsik Yong; Daniel J Battle; Wenqin Feng; Lili Wan; Gideon Dreyfuss
Journal:  Mol Cell Biol       Date:  2005-01       Impact factor: 4.272

10.  Activation of interferon regulatory factor-3 via toll-like receptor 3 and immunomodulatory functions detected in A549 lung epithelial cells exposed to misplaced U1-snRNA.

Authors:  Christian D Sadik; Malte Bachmann; Josef Pfeilschifter; Heiko Mühl
Journal:  Nucleic Acids Res       Date:  2009-06-18       Impact factor: 16.971

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