Literature DB >> 11348675

Comparison of microbial and meiofaunal community analyses for determining impact of heavy metal contamination.

R J Ellis1, B Neish, M W Trett, J G Best, A J Weightman, P Morgan, J C Fry.   

Abstract

The impact of long-term heavy metal contamination on soil communities was assessed by a number of methods. These included plate counts of culturable bacteria, community level physiological profiling (CLPP) by analysis of the utilization of multiple carbon sources in BIOLOG plates, community fatty acid methyl ester (C-FAME) profiling and dehydrogenase enzyme activity measurements. These approaches were complemented with microscopic assessments of the diversity of the nematode community. Samples from two sites with different histories of heavy-metal input were assessed. Major differences in microbial and meiofaunal parameters were observed both between and within the sites. There was a large degree of congruence between each of the microbiological approaches. In particular, one sample appeared to be distinguished by a reduction in culturable bacteria (especially pseudomonads), limited response to carbon sources in CLPP, and major differences in extracted fatty acid profiles. The use of multivariate analysis to examine the relationship between microbial and physicochemical measurements revealed that CLPP and plate counts were useful for determining the gross effect of metals on soil microbial communities, whereas proportions of metal-resistant bacteria and dehydrogenase activity differentiated between the two sites. Copper and zinc concentrations and pH all showed significant correlation with the microbial parameters. Nematode community structure was affected to a greater extent by soil pH than by metal content, but the within-site rankings were the same as those achieved for microbiological analyses. The use of these methods for field evaluation of the impact of industrial pollution may be possible provided care is taken when interpreting the data.

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Year:  2001        PMID: 11348675     DOI: 10.1016/s0167-7012(01)00245-7

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  15 in total

1.  Effects of water stress, organic amendment and mycorrhizal inoculation on soil microbial community structure and activity during the establishment of two heavy metal-tolerant native plant species.

Authors:  D A Fernández; A Roldán; R Azcón; F Caravaca; E Bååth
Journal:  Microb Ecol       Date:  2011-11-11       Impact factor: 4.552

2.  Cultivation-dependent and -independent approaches for determining bacterial diversity in heavy-metal-contaminated soil.

Authors:  Richard J Ellis; Philip Morgan; Andrew J Weightman; John C Fry
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

Review 3.  The genomic revolution: what does it mean for human and ecological risk assessment?

Authors:  Curtis C Travis; William E Bishop; David P Clarke
Journal:  Ecotoxicology       Date:  2003-12       Impact factor: 2.823

4.  Efficiencies of different microbial parameters as indicator to assess slight metal pollutions in a farm field near a gold mining area.

Authors:  Qiang Wang; Jiulan Dai; Yue Yu; Yongli Zhang; Tianlin Shen; Jiangsheng Liu; Renqing Wang
Journal:  Environ Monit Assess       Date:  2009-02-24       Impact factor: 2.513

5.  Interaction between the microbial community and invading Escherichia coli O157:H7 in soils from vegetable fields.

Authors:  Zhiyuan Yao; Haizhen Wang; Laosheng Wu; Jianjun Wu; Philip C Brookes; Jianming Xu
Journal:  Appl Environ Microbiol       Date:  2013-10-11       Impact factor: 4.792

6.  Culturable endophytic bacteria from the salt marsh plant Halimione portulacoides: phylogenetic diversity, functional characterization, and influence of metal(loid) contamination.

Authors:  Cátia Fidalgo; Isabel Henriques; Jaqueline Rocha; Marta Tacão; Artur Alves
Journal:  Environ Sci Pollut Res Int       Date:  2016-02-15       Impact factor: 4.223

7.  Radioecological risk assessment of low selenium concentrations through genetic fingerprints and metabolic profiling of soil bacterial communities.

Authors:  Céline Colinon-Dupuich; Laureline Février; Lionel Ranjard; Frédéric Coppin; Benoit Cournoyer; Sylvie Nazaret
Journal:  Microb Ecol       Date:  2011-03-16       Impact factor: 4.552

8.  The use of phospholipid fatty acid analysis to measure impact of acid rock drainage on microbial communities in sediments.

Authors:  E A Ben-David; P J Holden; D J M Stone; B D Harch; L J Foster
Journal:  Microb Ecol       Date:  2004-08-24       Impact factor: 4.552

9.  Estimation by PLFA of microbial community structure associated with the rhizosphere of Lygeum spartum and Piptatherum miliaceum growing in semiarid mine tailings.

Authors:  Lucía Carrasco; Andreas Gattinger; Andreas Fliessbach; Antonio Roldán; Michael Schloter; Fuensanta Caravaca
Journal:  Microb Ecol       Date:  2009-12-18       Impact factor: 4.552

10.  Detection of amount and activity of living algae in fresh water by dehydrogenase activity (DHA).

Authors:  Jun Xie; Wenrong Hu; Haiyan Pei; Mina Dun; Feng Qi
Journal:  Environ Monit Assess       Date:  2008-04-09       Impact factor: 2.513

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