Literature DB >> 11344322

Solution structure and backbone dynamics of an omega-conotoxin precursor.

D P Goldenberg1, R E Koehn, D E Gilbert, G Wagner.   

Abstract

Nuclear magnetic resonance spectroscopy was used to characterize the solution structure and backbone dynamics of a putative precursor form of omega-conotoxin MVIIA, a 25-amino-acid residue peptide antagonist of voltage-gated Ca(2+) channels. The mature peptide is found in the venom of a fish-hunting marine snail Conus magus and contains an amidated carboxyl terminus that is generated by oxidative cleavage of a Gly residue. The form examined in this study is identical to the mature peptide except for the presence of the unmodified carboxy-terminal Gly. This form, referred to as omega-MVIIA-Gly, has previously been shown to refold and form its disulfides more efficiently than the mature form, suggesting that the presence of the terminal Gly may favor folding in vivo. The nuclear magnetic resonance (NMR) structure determination indicated that the fold of omega-MVIIA-Gly is very similar to that previously determined for the mature form, but revealed that the terminal Gly residue participates in a network of hydrogen bonds involving both backbone and side chain atoms, very likely accounting for the enhanced stability and folding efficiency. (15)N relaxation experiments indicated that the backbone is well ordered on the nanosecond time scale but that residues 9-15 undergo a conformational exchange processes with a time constant of approximately 35 microseconds. Other studies have implicated this segment in the binding of the peptide to its physiological target, and the observed motions may play a role in allowing the peptide to enter the binding site

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Year:  2001        PMID: 11344322      PMCID: PMC2374133          DOI: 10.1110/ps.30701

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  51 in total

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2.  Hydrogen bonding stabilizes globular proteins.

Authors:  J K Myers; C N Pace
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3.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

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4.  Torsion angle dynamics for NMR structure calculation with the new program DYANA.

Authors:  P Güntert; C Mumenthaler; K Wüthrich
Journal:  J Mol Biol       Date:  1997-10-17       Impact factor: 5.469

5.  Effects of chirality at Tyr13 on the structure-activity relationships of omega-conotoxins from Conus magus.

Authors:  K J Nielsen; D A Adams; P F Alewood; R J Lewis; L Thomas; T Schroeder; D J Craik
Journal:  Biochemistry       Date:  1999-05-25       Impact factor: 3.162

6.  Diversity of Conus neuropeptides.

Authors:  B M Olivera; J Rivier; C Clark; C A Ramilo; G P Corpuz; F C Abogadie; E E Mena; S R Woodward; D R Hillyard; L J Cruz
Journal:  Science       Date:  1990-07-20       Impact factor: 47.728

7.  A novel D-leucine-containing Conus peptide: diverse conformational dynamics in the contryphan family.

Authors:  R B Jacobsen; E C Jimenez; R G De la Cruz; W R Gray; L J Cruz; B M Olivera
Journal:  J Pept Res       Date:  1999-08

8.  Characterization of pKa values and titration shifts in the cytotoxic ribonuclease alpha-sarcin by NMR. Relationship between electrostatic interactions, structure, and catalytic function.

Authors:  J M Pérez-Cañadillas; R Campos-Olivas; J Lacadena; A Martínez del Pozo; J G Gavilanes; J Santoro; M Rico; M Bruix
Journal:  Biochemistry       Date:  1998-11-10       Impact factor: 3.162

9.  Determinants of backbone dynamics in native BPTI: cooperative influence of the 14-38 disulfide and the Tyr35 side-chain.

Authors:  S A Beeser; T G Oas; D P Goldenberg
Journal:  J Mol Biol       Date:  1998-12-18       Impact factor: 5.469

10.  Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation.

Authors:  N A Farrow; R Muhandiram; A U Singer; S M Pascal; C M Kay; G Gish; S E Shoelson; T Pawson; J D Forman-Kay; L E Kay
Journal:  Biochemistry       Date:  1994-05-17       Impact factor: 3.162

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  3 in total

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Journal:  J Comput Aided Mol Des       Date:  2001-12       Impact factor: 3.686

2.  Structure, dynamics, and selectivity of the sodium channel blocker mu-conotoxin SIIIA.

Authors:  Shenggen Yao; Min-Min Zhang; Doju Yoshikami; Layla Azam; Baldomero M Olivera; Grzegorz Bulaj; Raymond S Norton
Journal:  Biochemistry       Date:  2008-09-18       Impact factor: 3.162

3.  NMR-based mapping of disulfide bridges in cysteine-rich peptides: application to the mu-conotoxin SxIIIA.

Authors:  Aleksandra Walewska; Jack J Skalicky; Darrell R Davis; Min-Min Zhang; Estuardo Lopez-Vera; Maren Watkins; Tiffany S Han; Doju Yoshikami; Baldomero M Olivera; Grzegorz Bulaj
Journal:  J Am Chem Soc       Date:  2008-10-03       Impact factor: 15.419

  3 in total

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