Literature DB >> 11338842

[A system of oligonucleotide primers for amplifying nifH genes from various taxonomic groups of prokaryotes].

A I Marusina1, E S Bulygina, B B Kuznetsov, T P Turova, I K Kravchenko, V F Gal'chenko.   

Abstract

Based on the analysis of the nifH gene nucleotide sequences from GenBank, a system of primers was developed that makes it possible to obtain 370- and 470-bp PCR fragments of the nifH gene of nitrogen-fixing bacteria and archaea. The effectiveness of the proposed system for revealing the presence of nifH genes was demonstrated by PCR on the DNA isolated from nitrogen-fixing prokaryotes for which the primary structure of these genes is known and which belong to different taxonomic groups. nifH sequences of nitrogen-fixing prokaryotes of the genera Xanthobacter, Beijerinckia, and Methanosarcina, for which the capacity for nitrogen fixation was demonstrated earlier, but no data existed on the nucleotide composition of these genes, were determined and deposited in GenBank.

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Year:  2001        PMID: 11338842

Source DB:  PubMed          Journal:  Mikrobiologiia        ISSN: 0026-3656


  6 in total

1.  Natronobacillus azotifigens gen. nov., sp. nov., an anaerobic diazotrophic haloalkaliphile from soda-rich habitats.

Authors:  I D Sorokin; E V Zadorina; I K Kravchenko; E S Boulygina; T P Tourova; D Y Sorokin
Journal:  Extremophiles       Date:  2008-09-04       Impact factor: 2.395

2.  The Use of Degenerate Primers in qPCR Analysis of Functional Genes Can Cause Dramatic Quantification Bias as Revealed by Investigation of nifH Primer Performance.

Authors:  John Christian Gaby; Daniel H Buckley
Journal:  Microb Ecol       Date:  2017-04-07       Impact factor: 4.552

3.  Nitrogen fixation by diverse diazotrophic communities can support population growth of arboreal ants.

Authors:  Maximilian Nepel; Josephine Pfeifer; Felix B Oberhauser; Andreas Richter; Dagmar Woebken; Veronika E Mayer
Journal:  BMC Biol       Date:  2022-06-09       Impact factor: 7.364

4.  Draft Genome Sequence of "Halomonas chromatireducens" Strain AGD 8-3, a Haloalkaliphilic Chromate- and Selenite-Reducing Gammaproteobacterium.

Authors:  Fedor S Sharko; Anna A Shapovalova; Svetlana V Tsygankova; Anastasia V Komova; Eugenia S Boulygina; Anton B Teslyuk; Pavel M Gotovtsev; Zorigto B Namsaraev; Tatiana V Khijniak; Artem V Nedoluzhko; Raif G Vasilov
Journal:  Genome Announc       Date:  2016-03-17

5.  Halotolerant biofilm-producing rhizobacteria mitigate seawater-induced salt stress and promote growth of tomato.

Authors:  Md Manjurul Haque; Md Sanaullah Biswas; Md Khaled Mosharaf; Md Amdadul Haque; Md Shahidul Islam; Kamrun Nahar; Md Mynul Islam; Habibul Bari Shozib; Md Mariful Islam
Journal:  Sci Rep       Date:  2022-04-04       Impact factor: 4.379

6.  A comprehensive evaluation of PCR primers to amplify the nifH gene of nitrogenase.

Authors:  John Christian Gaby; Daniel H Buckley
Journal:  PLoS One       Date:  2012-07-25       Impact factor: 3.240

  6 in total

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