Literature DB >> 11337503

Requirement for yeast TAF145 function in transcriptional activation of the RPS5 promoter that depends on both core promoter structure and upstream activating sequences.

Y Tsukihashi1, M Kawaichi, T Kokubo.   

Abstract

The general transcription factor TFIID has been shown to be involved in both core promoter recognition and the transcriptional activation of eukaryotic genes. We recently isolated TAF145 (one of TFIID subunits) temperature-sensitive mutants in yeast, in which transcription of the TUB2 gene is impaired at restrictive temperatures due to a defect in core promoter recognition. Here, we show in these mutants that the transcription of the RPS5 gene is impaired, mostly due to a defect in transcriptional activation rather than to a defect in core promoter recognition, although the latter is slightly affected as well. Surprisingly, the RPS5 core promoter can be activated by various activation domains fused to a GAL4 DNA binding domain, but not by the original upstream activating sequence (UAS) of the RPS5 gene. In addition, a heterologous CYC1 core promoter can be activated by RPS5-UAS at normal levels even in these mutants. These observations indicate that a distinct combination of core promoters and activators may exploit alternative activation pathways that vary in their requirement for TAF145 function. In addition, a particular function of TAF145 that is deleted in our mutants appears to be involved in both core promoter recognition and transcriptional activation.

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Year:  2001        PMID: 11337503     DOI: 10.1074/jbc.M102416200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  10 in total

1.  Identification of a transcriptional activation domain in yeast repressor activator protein 1 (Rap1) using an altered DNA-binding specificity variant.

Authors:  Amanda N Johnson; P Anthony Weil
Journal:  J Biol Chem       Date:  2017-02-14       Impact factor: 5.157

2.  Mutations on the DNA binding surface of TBP discriminate between yeast TATA and TATA-less gene transcription.

Authors:  Ivanka Kamenova; Linda Warfield; Steven Hahn
Journal:  Mol Cell Biol       Date:  2014-05-27       Impact factor: 4.272

3.  Functional characterization of core promoter elements: the downstream core element is recognized by TAF1.

Authors:  Dong-Hoon Lee; Naum Gershenzon; Malavika Gupta; Ilya P Ioshikhes; Danny Reinberg; Brian A Lewis
Journal:  Mol Cell Biol       Date:  2005-11       Impact factor: 4.272

4.  Yeast TFIID serves as a coactivator for Rap1p by direct protein-protein interaction.

Authors:  Krassimira A Garbett; Manish K Tripathi; Belgin Cencki; Justin H Layer; P Anthony Weil
Journal:  Mol Cell Biol       Date:  2006-10-30       Impact factor: 4.272

5.  Dissection of coactivator requirement at RNR3 reveals unexpected contributions from TFIID and SAGA.

Authors:  Hesheng Zhang; Jennifer A Kruk; Joseph C Reese
Journal:  J Biol Chem       Date:  2008-08-05       Impact factor: 5.157

6.  Highly redundant function of multiple AT-rich sequences as core promoter elements in the TATA-less RPS5 promoter of Saccharomyces cerevisiae.

Authors:  Fuminori Sugihara; Koji Kasahara; Tetsuro Kokubo
Journal:  Nucleic Acids Res       Date:  2010-08-30       Impact factor: 16.971

7.  A novel magnetic resonance-based method to measure gene expression in living cells.

Authors:  Sewon Ki; Fuminori Sugihara; Koji Kasahara; Hidehito Tochio; Azusa Okada-Marubayashi; Setsuko Tomita; Masahito Morita; Mitsunori Ikeguchi; Masahiro Shirakawa; Tetsuro Kokubo
Journal:  Nucleic Acids Res       Date:  2006-04-05       Impact factor: 16.971

8.  A Random Screen Using a Novel Reporter Assay System Reveals a Set of Sequences That Are Preferred as the TATA or TATA-Like Elements in the CYC1 Promoter of Saccharomyces cerevisiae.

Authors:  Kiyoshi Watanabe; Makoto Yabe; Koji Kasahara; Tetsuro Kokubo
Journal:  PLoS One       Date:  2015-06-05       Impact factor: 3.240

9.  SAGA mediates transcription from the TATA-like element independently of Taf1p/TFIID but dependent on core promoter structures in Saccharomyces cerevisiae.

Authors:  Kiyoshi Watanabe; Tetsuro Kokubo
Journal:  PLoS One       Date:  2017-11-27       Impact factor: 3.240

10.  Minimal components of the RNA polymerase II transcription apparatus determine the consensus TATA box.

Authors:  Gudrun Bjornsdottir; Lawrence C Myers
Journal:  Nucleic Acids Res       Date:  2008-04-01       Impact factor: 16.971

  10 in total

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